DRSC/TRiP Functional Genomics Resources

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Protein Alignment ath and mog-4

DIOPT Version :10

Sequence 1:NP_609356.2 Gene:ath / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_497027.1 Gene:mog-4 / 175117 WormBaseID:WBGene00003392 Length:1008 Species:Caenorhabditis elegans


Alignment Length:638 Identity:265/638 - (41%)
Similarity:403/638 - (63%) Gaps:19/638 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG-MIGITQ 120
            |:.|||:.:|||||:..|...::.::.:..::|..|||||||||:||:|..||:.:.| .||.||
 Worm   353 KKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQ 417

  Fly   121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVI 185
            ||||||::||.|||.|:...:|..|||::||||.||..|.::::|||:||||.:.:..|..|||:
 Worm   418 PRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482

  Fly   186 ILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYFNCKGMY-LEGRTY 249
            ::|||||||::.|:|||:|||..:.|:     :||::::|||:|.:.|.::|:...:: :.||.:
 Worm   483 MIDEAHERTLHTDILFGLVKDIARFRK-----DLKLLISSATLDAEKFSSFFDDAPIFRIPGRRF 542

  Fly   250 PVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTD 314
            ||.:.:|:....||:...:||:..||.|.|...|:|:|||||||||::.:.:.:.:|...:...:
 Worm   543 PVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKE 607

  Fly   315 LRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGL 379
            |....:||.|....|.:.|.|||.:.|||:|||||||||:||.||..|||.||.|:.||:...|:
 Worm   608 LIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGV 672

  Fly   380 DVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT----KAEMDSFADATQPEILRTNPTSMVLQLL 440
            :.|..|.||||.|.||||||||...|.|:|.||    |.|::   :...|||.|||..::||.|.
 Worm   673 EHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELE---EQPIPEIQRTNLGNVVLMLK 734

  Fly   441 ALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTA 504
            :|.| |..:|||||||.::.|..|.:.|.||||:....:  :|.|||:|.::|.||..||:::.:
 Worm   735 SLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGE--LTKLGRRMAEFPCDPCMSKMIIAS 797

  Fly   505 SSFGCMEEILSLVSVLSSD-HVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKM 568
            ..:.|.|||:::.::||.: .||.....:...|..|...|.|..|||:||:||:|.:.:|...:.
 Worm   798 EKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQR 862

  Fly   569 WCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSDDIEMLKKCILNGFFENIAVLQRDGFYIT 633
            ||.:||:..|::..||:||.||..:.|.:.:...||.|...::|.|..|:|.|::.|...|.|.|
 Worm   863 WCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSSTDTIKIRKAITAGYFYNVSKLDNTGHYKT 927

  Fly   634 ASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 686
            ......:..||:|.|. :..|.::::.|:|.|.:.|:|:::||...|:.||.|
 Worm   928 VKHKHTTHPHPNSCLF-EETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAP 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
athNP_609356.2 HrpA 67..>686 CDD:441249 259/626 (41%)
mog-4NP_497027.1 PTZ00121 <107..363 CDD:173412 4/9 (44%)
HrpA 355..>980 CDD:441249 264/636 (42%)

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