DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4901 and LOC110438502

DIOPT Version :9

Sequence 1:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_021326722.1 Gene:LOC110438502 / 110438502 -ID:- Length:511 Species:Danio rerio


Alignment Length:535 Identity:208/535 - (38%)
Similarity:313/535 - (58%) Gaps:48/535 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATM 228
            :|||:||||:|.|.|||:|:|:||||||||||:.|:|||:||.||:.|.:|....|||||.||||
Zfish     1 MTDGMLLREAIGDPLLLRYTVVILDEAHERTVHTDVLFGVVKAAQRRRLEQNRIPLKVVVMSATM 65

  Fly   229 DIDHFGNYFN-CKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQE 292
            |:|.|..||| ...:|||||.:|:::.:||:...||:...||::|.||:..|.:||:|:||||||
Zfish    66 DVDLFSQYFNKSPVLYLEGRQHPIQIYYTKQPQSDYLQAALVSIFQIHQEAPSSHDILVFLTGQE 130

  Fly   293 EIESLAQQIRQLAK--IDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNI---AET 352
            |||:||:..|.::|  .||:|:  :.|..|||.|...:|:..|:|.|    ||...|:.   ..|
Zfish   131 EIEALARTCRDISKHLPDTSGS--MTVVPLYASLPPAQQMRVFLPAP----KVSHTTHTHTHTHT 189

  Fly   353 SITI-PGIRCVIDCGFVKEKSFNTV--DGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKA 414
            ..|: ..|:  |...:......|.:  :|:::   .|:.:|..             :|.     .
Zfish   190 QYTLKQSIQ--IHTHYAHAHYINMLYCNGVEL---CRVPQAVC-------------SCV-----C 231

  Fly   415 EMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGDD 478
            ::.|..      :.|.|..|:|||||||.: |..||||:..|..:.:|:|.:.|..|||:...||
Zfish   232 QLYSLC------VCRCNLASVVLQLLALGVPDVLNFDFVSKPSPESMRTAVEQLCILGAVDRKDD 290

  Fly   479 SY-ITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAK 542
            .. :||||::|..:||:|::||.||.:..|.|.||||:::|:||.|.|..:...:.:.......|
Zfish   291 HVSLTPLGKKMACFPLEPRFSKTLLISPDFSCAEEILTIISLLSVDSVLYNPPARRDEVISVRKK 355

  Fly   543 FQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSS-DD 606
            |.|..|||:||||::..|.|....|.||.:|::|.|::.....||.|||:|...::|.|.|| .|
Zfish   356 FISSEGDHITLLNIYRAFKKVSGNKDWCRENFVNSRNMGLVGEVRAQLRDICIKMNLKLESSVCD 420

  Fly   607 IEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLR 671
            :..:::|:.:|.|.:.|.||.||.|:....:....|||||||. :.:|..:||.|::.|.:.::|
Zfish   421 LANVRRCLAHGLFMSAAELQPDGSYVALDTHQPVSIHPSSVLF-QARPVCVLFNELLHTSRCYMR 484

  Fly   672 QVTEISIEWIKEVVP 686
            .:..|..:|:.|..|
Zfish   485 DLCLIQTDWLHEAAP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4901NP_001334733.1 None
LOC110438502XP_021326722.1 HrpA 1..496 CDD:224557 206/530 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D136652at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.