DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx17 and SNX27

DIOPT Version :9

Sequence 1:NP_609353.1 Gene:Snx17 / 34354 FlyBaseID:FBgn0032191 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001317652.1 Gene:SNX27 / 81609 HGNCID:20073 Length:541 Species:Homo sapiens


Alignment Length:388 Identity:87/388 - (22%)
Similarity:154/388 - (39%) Gaps:63/388 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YTAYNIHINGIHHCVLRYKQLHSLNDQLRRHCVGVPLPPFPPKRLLPLTNGQLEARRSSLEQYLQ 86
            :..||:::.|...|..||::...|:..|:|.......|..|.|....|:..||:|||..||:||:
Human   180 FVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLE 244

  Fly    87 AVGQDNRLARSAHLQQFLQRA----------QLDTALAEGQVATDCEEQQLEVQVYTNPAGERIL 141
            .|.....:..|..:|:||..:          :|..||.:|...|        |:|..|...::: 
Human   245 KVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVT--------VRVKKNSTTDQV- 300

  Fly   142 VNCSVQQNASALLKSVCRELQLPDELVRFFCLFLVRRQRKSGELHLVRRLMDFESPYITRLHVQ- 205
                        .:::..::.:....|.:|.||.|...      ..||:|...|.|:  :|::| 
Human   301 ------------YQAIAAKVGMDSTTVNYFALFEVISH------SFVRKLAPNEFPH--KLYIQN 345

  Fly   206 -------PCELLLRTCYWDSSRDAKLTGSKVALNLLYNQTVADVNREWVVICTPGEGRQLNSLQM 263
                   .| |.:|...:.:..:..|..:.:|:...::|.|.||.:.:  |....:..||..|..
Human   346 YTSAVPGTC-LTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGY--IKAEEKSYQLQKLYE 407

  Fly   264 QGRAREYMDLVRQLPSYGCLQFDEAQVD-YPEPDTMALISIGNKELALRTARG-VKIYETKFRVT 326
            |.:...|::::|....|..:.|.....| ..:...:..|||.:.:|...|..| ::.....|...
Human   408 QRKMVMYLNMLRTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWD 472

  Fly   327 RMRSWRVSVTHITLESRLEPTHLQLAFEYLIGKQTLRWITINSDQAMLMSVCLQAMVDELLQR 389
            .|:.|..           :...:...|||..|::..||:.|.:.....|..|.:.:..||..|
Human   473 EMQRWDT-----------DEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWR 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx17NP_609353.1 PX_SNX17_31 7..108 CDD:132795 27/95 (28%)
FERM-like_C_SNX17 280..391 CDD:270145 24/112 (21%)
SNX27NP_001317652.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
PDZ_signaling 41..133 CDD:238492
PX_SNX27 160..265 CDD:132796 27/84 (32%)
FERM_F1_SNX27 273..365 CDD:340475 23/121 (19%)
FERM-like region F1 273..362 23/118 (19%)
FERM-like region F2 373..421 12/49 (24%)
FERM-like_C_SNX27 425..526 CDD:270146 23/111 (21%)
FERM-like region F3 425..525 23/111 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3784
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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