DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx17 and Snx31

DIOPT Version :9

Sequence 1:NP_609353.1 Gene:Snx17 / 34354 FlyBaseID:FBgn0032191 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001333951.1 Gene:Snx31 / 66696 MGIID:1913946 Length:439 Species:Mus musculus


Alignment Length:427 Identity:138/427 - (32%)
Similarity:220/427 - (51%) Gaps:35/427 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RMHFSIPDTQE----LGSSPTYTAYNIHINGIHHCVLRYKQLHSLNDQLRRHCVGVPLPPFPPKR 65
            :|||.||.:|:    ||.  .|..|:::::|...|.:||.|||..::|||| ..|..|||||||.
Mouse     2 KMHFCIPVSQQRPDALGG--RYVLYSVYLDGFLFCKVRYSQLHRWDEQLRR-VFGNCLPPFPPKY 63

  Fly    66 LLPLTNGQLEARRSSLEQYLQAVGQDNRLARSAHLQQFLQRAQLDTALAEGQVATDCEEQQLEVQ 130
            .|.:|....|.||..||:|||.|..|.|:.||....:||...||.|        .:...|.:|:.
Mouse    64 YLAMTTAMAEERRDQLERYLQNVTADPRVTRSDVFTEFLTLVQLHT--------LNITIQNVELA 120

  Fly   131 VYTNPAGERILVNCSVQQNASALLKSVCRELQLPDELVRFFCLFLVRRQRKSGELHLVRRLMDFE 195
            |:. |.|..|.|.......|..:|:.:..:|.|..:||.:|.|||: :....|:|.:|::|.|||
Mouse   121 VFL-PDGRSIKVEGLTSDTAERVLEVMAHKLGLQPDLVGYFGLFLI-QCFPEGKLSVVKKLADFE 183

  Fly   196 SPY--ITRLHVQPCELLLRTCYWDSSRDAKLTGSKVALNLLYNQTVADVNREWVVICTPGEGRQL 258
            .||  :....::.|::.||..|.|.:.|:.|...:.|.:|||.|.|.|:.:||:. .|..:..:|
Mouse   184 LPYTSLQSSEMENCKIGLRKWYLDPALDSMLMDCRAAGDLLYMQAVQDIEKEWMK-PTQAQREEL 247

  Fly   259 NSLQMQGRAREYMDLVRQLPSYGCLQFDEAQVDYPEPDTMALISIGNKELA-LRTARGVKIYETK 322
            .:||.:....::::|.:::..||.:|.|....::|||...|.:||||.|:: ..|....:|.:..
Mouse   248 KALQKKENQTKFLELSQEVRHYGYVQLDPCTCNHPEPGCGAQLSIGNNEISCCITLPNGQIQDIA 312

  Fly   323 FRVTRMRSWRVSVTHITLES----RLEPTHLQLAFEYLIGKQTLRWITINSDQAMLMSVCLQAMV 383
            |:::|::.|:|:.....|::    |....:|:|.|:| ......:|..|.:.||..:|.||:.|:
Mouse   313 FQMSRVKCWQVTFLGTLLDTDGPQRTLNQNLELRFQY-SEDSCQQWFVIYTKQAFFLSSCLKKMI 376

  Fly   384 DELLQRGAGSGKDQNSDEEQ----EQNAVTSSSSTPS 416
            .|.:.:     ..:.|.|.|    ||.......|.||
Mouse   377 SERMTK-----LTEQSPEMQIEVPEQGRSKKHPSQPS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx17NP_609353.1 PX_SNX17_31 7..108 CDD:132795 45/104 (43%)
FERM-like_C_SNX17 280..391 CDD:270145 34/115 (30%)
Snx31NP_001333951.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..409 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6365
eggNOG 1 0.900 - - E1_KOG3784
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D263172at33208
OrthoFinder 1 1.000 - - FOG0003603
OrthoInspector 1 1.000 - - otm43839
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12431
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2951
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.950

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