DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx17 and Snx27

DIOPT Version :10

Sequence 1:NP_609353.1 Gene:Snx17 / 34354 FlyBaseID:FBgn0032191 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_727023.1 Gene:Snx27 / 31493 FlyBaseID:FBgn0052758 Length:531 Species:Drosophila melanogaster


Alignment Length:397 Identity:98/397 - (24%)
Similarity:163/397 - (41%) Gaps:64/397 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SIPDTQELG-SSPTYTAYNIHINGIHHCVLRYKQLHSLNDQLRRHCVGVPLPPFPPKRLLPLTNG 72
            ||||...:. :...|..:|||:.|...|..||::..:|:..||:...|...|..|.|....|:..
  Fly   171 SIPDYGIVNRNGERYIVFNIHMAGRQLCSRRYREFANLHSLLRKEFSGFNFPKLPGKWPFQLSEQ 235

  Fly    73 QLEARRSSLEQYLQAVGQDNRLARSAHLQQFLQRAQLDTALAEGQVATDCEE----QQLEVQVYT 133
            ||:.||..|||||:.|.....:|.|..:|.||               ||.|:    ..::::|..
  Fly   236 QLDTRRRGLEQYLEKVCAVRVIAESDAVQDFL---------------TDTEDDISASPVDIKVML 285

  Fly   134 NPAGERILVNCSVQQNASALLKSVCRELQLPDELVRFFCLFLVRRQRKSGELHLVRRLMDFESPY 198
             |..|...|:.....||..:.:.:.:...|.....::|.||.:      .|.:..|:|...|.|:
  Fly   286 -PDHEVSTVSVKKSSNAQVVWEILVQRANLTAYTQQYFYLFEI------VEYNFERKLQPHEIPH 343

  Fly   199 ITRLHVQPCELLLRTCY----W--DSSRDAKLTGSKVALNLLYNQTVADVNREWVVICTPGEGR- 256
              :|:||.......||.    |  ..:::..|...:.|...::.|.|.:|||..:    ..:|| 
  Fly   344 --QLYVQNYSTASSTCLCVRRWLFSVAKELTLPDGEQAGRFIFYQAVDEVNRGNI----RADGRL 402

  Fly   257 -QLNSLQMQGRAREYMDLVRQLPSYGCLQFDEAQVDYPEPDTMALISIGNKELALRTARGVKIYE 320
             :|.:||...:|.:|:.|.|.||.||.:.|.....|            ..||..:..|.|:|   
  Fly   403 YELKALQDAKKAGDYLALARTLPGYGDVVFPHCSCD------------SRKEGHVVPAVGMK--- 452

  Fly   321 TKFRVTRMR---SWRVSVTHITLE----SRLEPTHLQLAFEYLIGKQTLRWITINSDQAMLMSVC 378
             .||:...|   |....:..:|.:    |..:...:...|:|....:..||:.:.:.....::.|
  Fly   453 -SFRLHACREDGSLEAQMVELTWDSITRSESDEESMSFCFQYNRPDKPARWVKVYTPYHAFLADC 516

  Fly   379 LQAMVDE 385
            ...:::|
  Fly   517 FDRIMEE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx17NP_609353.1 PX_SNX17_31 7..108 CDD:132795 35/99 (35%)
FERM_F1_SNX17 125..217 CDD:340538 21/97 (22%)
FERM-like_C_SNX17 280..391 CDD:270145 21/113 (19%)
Snx27NP_727023.1 PDZ_SNX27-like 47..139 CDD:467283
PX_SNX27 165..270 CDD:132796 36/113 (32%)
FERM_F1_SNX27 277..368 CDD:340475 21/99 (21%)
FERM-like_C_SNX27 428..528 CDD:270146 20/112 (18%)
Blue background indicates that the domain is not in the aligned region.

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