DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7 and RPL7A

DIOPT Version :9

Sequence 1:NP_001285794.1 Gene:RpL7 / 34352 FlyBaseID:FBgn0005593 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_011439.1 Gene:RPL7A / 852804 SGDID:S000003044 Length:244 Species:Saccharomyces cerevisiae


Alignment Length:251 Identity:126/251 - (50%)
Similarity:176/251 - (70%) Gaps:18/251 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AAKKLPAVPESKLKFSKKQISKRVAE---SKRRLKKAAVIALRKKEN----LVRAEKYQNEYIKA 67
            ||:|: ..|||:||.||.|  ::.||   ::|..:|||     .||.    |.|...||.||..|
Yeast     2 AAEKI-LTPESQLKKSKAQ--QKTAEQVAAERAARKAA-----NKEKRAIILERNAAYQKEYETA 58

  Fly    68 EQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKAT 132
            |:..|:.:|.||....:||.|:.||.|||||:||||:.||.||||||.||.:||:|.|:|:.|||
Yeast    59 ERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKAT 123

  Fly   133 INMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHE 197
            :.:|::.|||:.:|||:..::|:|:|||||.|.|:||||::||.:||..|.: :.|..::||:||
Yeast   124 LELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGK-YGILSIDDLIHE 187

  Fly   198 IFTVGPNFKYASNFLWPFKLNTPTGGW--RKKANHYVNGGDFGNREDQINRLLRKM 251
            |.||||:||.|:||||||||:.|:|||  .:|..|::.||.|||||:.||:|::.|
Yeast   188 IITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVKSM 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7NP_001285794.1 uL30_euk 19..252 CDD:273548 122/242 (50%)
Ribosomal_L30_N 20..90 CDD:285340 29/76 (38%)
Ribosomal_L7_archeal_euk 92..252 CDD:100099 91/162 (56%)
RPL7ANP_011439.1 uL30_euk 10..244 CDD:273548 122/242 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344205
Domainoid 1 1.000 133 1.000 Domainoid score I1108
eggNOG 1 0.900 - - E1_COG1841
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H87772
Inparanoid 1 1.050 238 1.000 Inparanoid score I700
Isobase 1 0.950 - 0 Normalized mean entropy S407
OMA 1 1.010 - - QHG53947
OrthoFinder 1 1.000 - - FOG0001677
OrthoInspector 1 1.000 - - otm46661
orthoMCL 1 0.900 - - OOG6_100755
Panther 1 1.100 - - LDO PTHR11524
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1144
SonicParanoid 1 1.000 - - X1237
TreeFam 1 0.960 - -
1615.740

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