DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7 and RpL7-like

DIOPT Version :9

Sequence 1:NP_001285794.1 Gene:RpL7 / 34352 FlyBaseID:FBgn0005593 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001097151.1 Gene:RpL7-like / 34625 FlyBaseID:FBgn0032404 Length:257 Species:Drosophila melanogaster


Alignment Length:256 Identity:87/256 - (33%)
Similarity:141/256 - (55%) Gaps:16/256 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KKPAAKKLPAVPESKLKFSKKQI--SKRVAESKR--RLKKAAVIALRKKENLVRAEKYQNEYIKA 67
            |.....|||....|.||..|::|  .:.|...||  |:||..  |.:......|||.:...|:||
  Fly     4 KYAVPNKLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRT--ATKNHHKFRRAESFVMGYLKA 66

  Fly    68 EQREIKLRRLAKKRNQFYVPAEA------KLAFVVRIRGINKVAPK-VRKVLQLFRLRQINNGVF 125
            |:...::::...:.|.....|:|      ||.||:|..| .|:..| ...:.:..|:...:|.||
  Fly    67 ERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAG-KKIFDKTTADIFRTLRMGSRHNAVF 130

  Fly   126 IKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQC 190
            ::..|....:||:.||::.:|.|:|.|:|||::|:||.:.:.::..|..|.::|::|.....| |
  Fly   131 MENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVI-C 194

  Fly   191 VEDLVHEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKAN-HYVNGGDFGNREDQINRLLRK 250
            :||::|||.||||||...:.||..|.|::|:.||:||.: .|..||::|:|...||.|:.:
  Fly   195 LEDIIHEICTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7NP_001285794.1 uL30_euk 19..252 CDD:273548 83/244 (34%)
Ribosomal_L30_N 20..90 CDD:285340 21/73 (29%)
Ribosomal_L7_archeal_euk 92..252 CDD:100099 60/161 (37%)
RpL7-likeNP_001097151.1 uL30_euk 18..257 CDD:273548 82/242 (34%)
Ribosomal_L7_archeal_euk 97..257 CDD:100099 60/161 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451806
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1841
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S407
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001677
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11524
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.790

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