DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7 and rpl702

DIOPT Version :9

Sequence 1:NP_001285794.1 Gene:RpL7 / 34352 FlyBaseID:FBgn0005593 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_594185.1 Gene:rpl702 / 2543448 PomBaseID:SPAC3H5.07 Length:250 Species:Schizosaccharomyces pombe


Alignment Length:254 Identity:132/254 - (51%)
Similarity:179/254 - (70%) Gaps:17/254 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AAKKLPAV-----PESKLKFSKKQISKRVAESKRRLKKAAV---IALRKKENLV--RAEKYQNEY 64
            |:..:|:|     |||.||.:|.|     .:|:.::..||.   .|.:||..|:  |||.|:.||
pombe     3 ASSTVPSVASIFAPESLLKKTKAQ-----KQSREQIVAAAAEKKSARQKKRELIAKRAEAYEAEY 62

  Fly    65 IKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLN 129
            ..||:.:|:|.|.|:....::||.|.||.|||||||||.:.||.||::||.||.|||||:|:|.|
pombe    63 RAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFN 127

  Fly   130 KATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDL 194
            ||...||::.|||:|:|.||.|:||||||||||.|.|:||:|::||.:||..|.: :.|..||||
pombe   128 KAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGK-YSILSVEDL 191

  Fly   195 VHEIFTVGPNFKYASNFLWPFKLNTPTGGWR-KKANHYVNGGDFGNREDQINRLLRKMV 252
            :|||:|||||||.|:||||||||::|.|||| :|..|::.|||.|.|::.||.|::||:
pombe   192 IHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKML 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7NP_001285794.1 uL30_euk 19..252 CDD:273548 127/238 (53%)
Ribosomal_L30_N 20..90 CDD:285340 26/74 (35%)
Ribosomal_L7_archeal_euk 92..252 CDD:100099 98/160 (61%)
rpl702NP_594185.1 uL30_euk 17..250 CDD:273548 127/238 (53%)
Ribosomal_L30_N 18..88 CDD:285340 26/74 (35%)
Ribosomal_L7_archeal_euk 90..250 CDD:100099 98/160 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 142 1.000 Domainoid score I1187
eggNOG 1 0.900 - - E1_COG1841
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H87772
Inparanoid 1 1.050 255 1.000 Inparanoid score I762
OMA 1 1.010 - - QHG53947
OrthoFinder 1 1.000 - - FOG0001677
OrthoInspector 1 1.000 - - otm47117
orthoMCL 1 0.900 - - OOG6_100755
Panther 1 1.100 - - O PTHR11524
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1144
SonicParanoid 1 1.000 - - X1237
TreeFam 1 0.960 - -
1413.860

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