DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL7 and rpl-7

DIOPT Version :9

Sequence 1:NP_001285794.1 Gene:RpL7 / 34352 FlyBaseID:FBgn0005593 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_490676.1 Gene:rpl-7 / 171602 WormBaseID:WBGene00004418 Length:244 Species:Caenorhabditis elegans


Alignment Length:241 Identity:142/241 - (58%)
Similarity:181/241 - (75%) Gaps:1/241 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRR 76
            ||:|.|||:.||..|::...|...::.::..||....:|.:...|||||..||..|::..::|:|
 Worm     5 KKVPQVPETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKEGLRLKR 69

  Fly    77 LAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEP 141
            .|:.:..||||||.|:||||||||||::.||.||.||:.||||||||||:||||||:.:|||.||
 Worm    70 EAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEP 134

  Fly   142 YITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFK 206
            |:.|||||.|::.:|:||||:.|.:..|||||||.::|:.|.: ..|.|:|||.|||.||||:||
 Worm   135 YVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGK-FNIICLEDLAHEIATVGPHFK 198

  Fly   207 YASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 252
            .|:|||||||||.|||||.||.||:|.||||||||||||.||||||
 Worm   199 EATNFLWPFKLNNPTGGWTKKTNHFVEGGDFGNREDQINNLLRKMV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL7NP_001285794.1 uL30_euk 19..252 CDD:273548 135/232 (58%)
Ribosomal_L30_N 20..90 CDD:285340 23/69 (33%)
Ribosomal_L7_archeal_euk 92..252 CDD:100099 109/159 (69%)
rpl-7NP_490676.1 uL30_euk 12..244 CDD:273548 135/232 (58%)
Ribosomal_L30_N 13..83 CDD:285340 23/69 (33%)
Ribosomal_L7_archeal_euk 85..244 CDD:100099 109/159 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160186
Domainoid 1 1.000 161 1.000 Domainoid score I2452
eggNOG 1 0.900 - - E1_COG1841
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H87772
Inparanoid 1 1.050 293 1.000 Inparanoid score I1678
Isobase 1 0.950 - 0 Normalized mean entropy S407
OMA 1 1.010 - - QHG53947
OrthoDB 1 1.010 - - D1544778at2759
OrthoFinder 1 1.000 - - FOG0001677
OrthoInspector 1 1.000 - - oto19748
orthoMCL 1 0.900 - - OOG6_100755
Panther 1 1.100 - - LDO PTHR11524
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1144
SonicParanoid 1 1.000 - - X1237
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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