DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and YCF1

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_010419.3 Gene:YCF1 / 851713 SGDID:S000002542 Length:1515 Species:Saccharomyces cerevisiae


Alignment Length:2243 Identity:514/2243 - (22%)
Similarity:836/2243 - (37%) Gaps:815/2243 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CGIDRVRRVFTFFSIFLLLFGLMFVCSRYKKCHKTLLTFHN----GRAAISLLLLALNSFDLARI 89
            |.||.|  :....:||::.||:..:.:..||.|..:....|    .|.|:.||.:|..|  ||.:
Yeast    31 CFIDGV--ILNLSAIFMITFGIRDLVNLCKKKHSGIKYRRNWIIVSRMALVLLEIAFVS--LASL 91

  Fly    90 FLPHQNVRNLNRLFQSSPRDLNYLVVIGSGELWNALFSTLLTLMLMLYHRMVERKKA----TVFL 150
            .:..:...|...:.|.:                    ||:|:|.:.|....:|..::    ||.|
Yeast    92 NISKEEAENFTIVSQYA--------------------STMLSLFVALALHWIEYDRSVVANTVLL 136

  Fly   151 YASTAVEALTFALLSNEL----FELVRYEDFLELQT--CLVAMSAMCMVSLAMLDG--------- 200
            :.........||.|.|.|    :|.:.|..    ||  .|.....:...|:.:|:.         
Yeast   137 FYWLFETFGNFAKLINILIRHTYEGIWYSG----QTGFILTLFQVITCASILLLEALPKKPLMPH 197

  Fly   201 ------LTVYKECYHDDYLDDYGKIGYKHSMATFYSKSCFWWLTPLLWLGYKEPLELEDLGQM-- 257
                  ||..|...:|.              |..:|:..|.|::.|:..||::.|...||.::  
Yeast   198 QHIHQTLTRRKPNPYDS--------------ANIFSRITFSWMSGLMKTGYEKYLVEADLYKLPR 248

  Fly   258 -----KLEDSARSHYDHFLYIYTEKKKKSNSSPSLWYCYIKNSWQMFALGGILKLAGDLFALIGP 317
                 :|......::::      |.|:|||  |||.:...:.......|....|...|:.|...|
Yeast   249 NFSSEELSQKLEKNWEN------ELKQKSN--PSLSWAICRTFGSKMLLAAFFKAIHDVLAFTQP 305

  Fly   318 LAIQKIVEYIEQLYAQASEPPAKSPGNEVANVLLSTSRILGTEFDEVFGTNIDKVRIYSSTWSDL 382
            ..::.:::::....::..:..:...|.|                    ..:..|:.|        
Yeast   306 QLLRILIKFVTDYNSERQDDHSSLQGFE--------------------NNHPQKLPI-------- 342

  Fly   383 LANGWCIAWIVLLAAITQ-GALSQASTHILNMTGIRIKTSLQGLIYRKSLLLNADGGCDSSDSAG 446
             ..|:.||:.:.|...|| ..|.|...::.| ||:.||::|..|||:|||:|       |::::|
Yeast   343 -VRGFLIAFAMFLVGFTQTSVLHQYFLNVFN-TGMYIKSALTALIYQKSLVL-------SNEASG 398

  Fly   447 QVQSTSSTSDEKQKNDDSMATPEHVDNPSEPNISHDIGSITNHMTEDTRNIMEFFLIIHYAWAIP 511
                .|||                             |.|.|.|:.|.:.:.:....::..|:.|
Yeast   399 ----LSST-----------------------------GDIVNLMSVDVQKLQDLTQWLNLIWSGP 430

  Fly   512 FKIAVVIYLLYMNLGISAVIGSIACIVIMTPLQFFIGNAMSKNAEVIAGYTDERLKRIHDTLVGI 576
            |:|.:.:|.||..||.|..:| :..:|||.||..|:.....|..:....|.|||.:.|.:.|..|
Yeast   431 FQIIICLYSLYKLLGNSMWVG-VIILVIMMPLNSFLMRIQKKLQKSQMKYKDERTRVISEILNNI 494

  Fly   577 KVIKLNAWDEVFLKKIQEAR-RKELKYLNKDATFWTLMAVLTHIATVLITFVTLGVYVWLHRDQE 640
            |.:||.||::.:.:|::|.| .||||.|.|...:..:.:...:|...|::..|..|:|:   .::
Yeast   495 KSLKLYAWEKPYREKLEEVRNNKELKNLTKLGCYMAVTSFQFNIVPFLVSCCTFAVFVY---TED 556

  Fly   641 FDLNASRLFSSLALFQQLTVPLLIFPITVPIIIAARVSTRRLERFLKSSEIQKQFEGIRNMARIL 705
            ..|....:|.:|.||..|:.||:|.|:.:...|.|.||..||..|..:.|:|             
Yeast   557 RALTTDLVFPALTLFNLLSFPLMIIPMVLNSFIEASVSIGRLFTFFTNEELQ------------- 608

  Fly   706 SKSDASLDMYETQEKSNMTMRTAQAENRLNEKRLAQKSQTPELATNSTPLLQNAEESAEDISPST 770
                                                                          |.:
Yeast   609 --------------------------------------------------------------PDS 611

  Fly   771 VQELGHNKLVQQRRELLRNTPYVAIRPPKMRGSVMERPVEFSVIRARNTDSWRRDSLLLKMPDDI 835
            ||.|                       ||                             :|...|:
Yeast   612 VQRL-----------------------PK-----------------------------VKNIGDV 624

  Fly   836 AVSI-NDGLFTWQPQSQMPVVQLHVPGIIVPKGKLTIVVGKNGSGKTSLLSALLMEMPLLAGNMF 899
            |::| :|..|.||.:.:..|...:: .....||.||.:|||.|||||:|||.:|.::..:.|...
Yeast   625 AINIGDDATFLWQRKPEYKVALKNI-NFQAKKGNLTCIVGKVGSGKTALLSCMLGDLFRVKGFAT 688

  Fly   900 WHKTCTISYVSQQPWLLNDTIRENILFGESFRPKRYDFVLEACALKPDIELMPRGDLSIIGERGI 964
            .|.  :::||||.||::|.|::||||||..:..:.|:..::||||..|:.::..||.:::||:||
Yeast   689 VHG--SVAYVSQVPWIMNGTVKENILFGHRYDAEFYEKTIKACALTIDLAILMDGDKTLVGEKGI 751

  Fly   965 NISGGQRQRIAIARAIYSSANVVIMDDPLASLDNEVGEHIFQHCIREMLQKSNRTFILVTQQLHR 1029
            ::||||:.|:::|||:|:.|:..::|||||::|..|..|:.:|.:........:|.:|.|.::..
Yeast   752 SLSGGQKARLSLARAVYARADTYLLDDPLAAVDEHVARHLIEHVLGPNGLLHTKTKVLATNKVSA 816

  Fly  1030 IKEAEYLIAIKDGRVEACGSYADIELMQPRITAEWNAIIAMAKAKN-DNPSQNPGEKTAGERWKL 1093
            :..|:.:..:.:|.:...|:|.:|                   .|: |:|           .|||
Yeast   817 LSIADSIALLDNGEITQQGTYDEI-------------------TKDADSP-----------LWKL 851

  Fly  1094 LKNVSKLGLQRSISVTMDANVACHADAIDGSGCISVANMQSNVVEEDDQVSV---SYPI-GNASC 1154
            |.|..|..                             |.:||...:..:.||   |.|: |... 
Yeast   852 LNNYGKKN-----------------------------NGKSNEFGDSSESSVRESSIPVEGELE- 886

  Fly  1155 GGFNLQRKRSSIYGSRHLMYDVPLPIDECQGDDVIMRPRRRHTLGRRGSRNTNSSHRLSGLSTLT 1219
               .||:.....:|:               .|.:.:|.....|||                    
Yeast   887 ---QLQKLNDLDFGN---------------SDAISLRRASDATLG-------------------- 913

  Fly  1220 ATSESSSISGDVLSRSVLATSCSSYAESSVDGGDLATAAPEPRVQSWQPPQHVTHHQPLSRNASS 1284
                                        |:|.||                               
Yeast   914 ----------------------------SIDFGD------------------------------- 919

  Fly  1285 PPAMEVANPDVKKSEEARRSNTSSESPLDDHVRGSFQQFLRRMSMRRSNKPKNHHHPLSATNSIL 1349
                                        |:::                  .|..|          
Yeast   920 ----------------------------DENI------------------AKREH---------- 928

  Fly  1350 SISEESPPVVHFPASILATDGNKNETQSEEKPKKCVNIDSKETTINCDDNCYSASDKELRANVTS 1414
                                                                             
Yeast   929 ----------------------------------------------------------------- 928

  Fly  1415 SPADQEQHNERHVLAEVAGESGRESMPLARLAIDTERKYGKISDDIYLMYIRAAGLPIITIFFIT 1479
                                                |:.||:..:|||.|.:|.....:.:|.:.
Yeast   929 ------------------------------------REQGKVKWNIYLEYAKACNPKSVCVFILF 957

  Fly  1480 ALIWQCLRVYTDIWLQQWSNVHGRVASKGHVVLHPSEQDHEVTYYFRMYAAISCVCIIMALVST- 1543
            .:|...|.|..::||:.||.|:.|..|      :|:     ...|..:|.|:.....:..|:.| 
Yeast   958 IVISMFLSVMGNVWLKHWSEVNSRYGS------NPN-----AARYLAIYFALGIGSALATLIQTI 1011

  Fly  1544 PAGQYAGCNARRNLHDKLLQTILHKTLHFFQVTPLGRIVNRFSNDMAVIDKKIAATGQRLLQFTL 1608
            ....:...:|.:.||:.:..::|...:.||:.||:|||:||||||:..:|..:..|      |:.
Yeast  1012 VLWVFCTIHASKYLHNLMTNSVLRAPMTFFETTPIGRILNRFSNDIYKVDALLGRT------FSQ 1070

  Fly  1609 LCLSAILINVTI-----TPW-ILVLTLPICGAYYLIQKFYRCSARELQRIENATNSPVISHLSET 1667
            ..::|:.:..||     |.| .:.:.:|:...|...|::|..::|||:|:::.|.||:.||..||
Yeast  1071 FFVNAVKVTFTITVICATTWQFIFIIIPLSVFYIYYQQYYLRTSRELRRLDSITRSPIYSHFQET 1135

  Fly  1668 IQGVTTIRAFNQQTRFTEILFKRLEANTIAYALLNTSHRWLGVSLDYLGGCIVFVATVTALTAAS 1732
            :.|:.|:|.::||.||:.|...|::.|..|:.....::|||...|:.:|..|:       |.||:
Yeast  1136 LGGLATVRGYSQQKRFSHINQCRIDNNMSAFYPSINANRWLAYRLELIGSIII-------LGAAT 1193

  Fly  1733 VSCRRHYEATTSPSASASPSPFETYAVTKSPSELRPSPSLVGLAINYTLLVPIYLNWVVKLLADM 1797
            :|..|..:.|.                         :..:|||:::|.|.:...|||:|::..::
Yeast  1194 LSVFRLKQGTL-------------------------TAGMVGLSLSYALQITQTLNWIVRMTVEV 1233

  Fly  1798 EMYAGSVERIAHYAQGQDADADADADADADVDADLDHEPSSNEDVSAEVDRSSQSDAGDKVYPGA 1862
            |....|||||..|       ||..::|...|                                  
Yeast  1234 ETNIVSVERIKEY-------ADLKSEAPLIV---------------------------------- 1257

  Fly  1863 TTAAGDVDEDGDQQRIGGARGGGGDCGYRQGHENGAEANADKLNAGNVTGDGNHLNFHHPPATAG 1927
                                         :||.                                
Yeast  1258 -----------------------------EGHR-------------------------------- 1261

  Fly  1928 DKVEQATTKTSVIKDKQLPPQQDDKDKKVVLPNEPARKLERYQSVPISWPQRGDIHFDNVSLRYE 1992
                              ||::                          ||.:|||.|:|.|.||.
Yeast  1262 ------------------PPKE--------------------------WPSQGDIKFNNYSTRYR 1282

  Fly  1993 GQKQNVISNLTLKIPAGQRIGICGRTGSGKSSLGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRT 2057
            .:...|:.::.:.|...:::||.||||:|||||.|:||.:::.:.|:|.||::.|..|...:||.
Yeast  1283 PELDLVLKHINIHIKPNEKVGIVGRTGAGKSSLTLALFRMIEASEGNIVIDNIAINEIGLYDLRH 1347

  Fly  2058 RLSIIPQDVHLFNATIRENLDPHGYFQDLQLWNCLELAQLKEFVNGHLPLGLDTVICDGGLNLSA 2122
            :|||||||..:|..|:|||:||...:.|..:|..|||:.|||.|......|||..:.:||.|||.
Yeast  1348 KLSIIPQDSQVFEGTVRENIDPINQYTDEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSV 1412

  Fly  2123 GHRQLLCLARAILRGSVCLVLDEATSVLDSSTESALLKAADLAFRGRTIITIAHRLTTILDYDRL 2187
            |.|||||||||:|..|..|||||||:.:|..|:..:.:....||:.|||:||||||.||:|.||:
Yeast  1413 GQRQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRI 1477

  Fly  2188 IVLDQGRIVEDGNPRELQQLEGSVFRGL-LEKG 2219
            ||||.|::.|..:|.:|.....|:|..| :|.|
Yeast  1478 IVLDNGKVAEFDSPGQLLSDNKSLFYSLCMEAG 1510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
YCF1NP_010419.3 MRP_assoc_pro 27..1511 CDD:188098 514/2243 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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