DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and ABCC15

DIOPT Version :10

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_191656.2 Gene:ABCC15 / 825269 AraportID:AT3G60970 Length:1053 Species:Arabidopsis thaliana


Alignment Length:1754 Identity:365/1754 - (20%)
Similarity:601/1754 - (34%) Gaps:742/1754 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 MTEDTRNIMEFFLIIHYAWAIPFKIAVVIYLLYMNLGISAVIGSIACIVIMT---PLQFFIGNAM 551
            |:.|.:.|.:|...::..|.:|.:|...||:|..:||:.|:...:..:::|.   ||.....|..
plant     1 MSVDVQRITDFIWYVNSIWMLPIQIFSAIYILQKHLGLGALAALVTTLMVMACNYPLTRLQRNYQ 65

  Fly   552 SKNAEVIAGYTDERLKRIHDTLVGIKVIKLNAWDEVFLKKIQEARRKELKYLNK-----DATFWT 611
            |.    |....|:|:|...:.|..:|::||.|||..||.|::..|:||...|.|     |.|.:.
plant    66 SD----IMNAKDDRMKATSEILKNMKILKLQAWDNQFLNKVKTLRKKEYDCLWKSLRLQDFTTFI 126

  Fly   612 LMAVLTHIATVLITFVT---LGVYVWLHRDQEFDLNASRLFSSLALFQQLTVPLLIFPITVPIII 673
            |....:.|:  ::||||   :||          .|.|..:.|:||.||.|..|:...|..:..::
plant   127 LWGAPSLIS--VVTFVTCMLMGV----------KLTAGAVLSALATFQMLQSPIFGLPDLLSALV 179

  Fly   674 AARVSTRRLERFLKSSEIQKQFEGIRNMARILSKSDASLDMYETQEKSNMTMRTAQAENRLNEKR 738
            .::||..|:..:|:.||.||               ||                            
plant   180 QSKVSADRIASYLQQSETQK---------------DA---------------------------- 201

  Fly   739 LAQKSQTPELATNSTPLLQNAEESAEDISPSTVQELGHNKLVQQRRELLRNTPYVAIRPPKMRGS 803
                                .|..:.|          |                           
plant   202 --------------------VEYCSND----------H--------------------------- 209

  Fly   804 VMERPVEFSVIRARNTDSWRRDSLLLKMPDDIAVSINDGLFTWQPQSQMPV---VQLHVPGIIVP 865
                 .|||                        |.|.:|.|:|:|:|..|.   ::|.     |.
plant   210 -----TEFS------------------------VEIENGAFSWEPESSRPTLDDIELK-----VK 240

  Fly   866 KGKLTIVVGKNGSGKTSLLSALLMEMPLLAGNMFWHKTCTIS----YVSQQPWLLNDTIRENILF 926
            .|....:.|..||||:||.|::|.|:..|.|      |..:|    ||.|.||:|:.|||:||||
plant   241 SGMKVAICGAVGSGKSSLPSSILGEIQKLKG------TVRVSGKQAYVPQSPWILSGTIRDNILF 299

  Fly   927 GESFRPKRYDFVLEACALKPDIELMPRGDLSIIGERGINISGGQRQRIAIARAIYSSANVVIMDD 991
            |..:..::|:..::||||..|.||...|||:.|||||||:||||:|||.||||:|.:|::.::||
plant   300 GSIYESEKYERTVKACALIKDFELFSNGDLTEIGERGINMSGGQKQRIQIARAVYQNADIYLLDD 364

  Fly   992 PLASLDNEVGEHIFQHCIREMLQKSNRTFILVTQQLHRIKEAEYLIAIKDGRVEACGSYADIELM 1056
            |.:::|...|..:|:.|:..:|:  ::|.:.||.|:..:..|:.::.:::|||...|.:.::   
plant   365 PFSAVDAHTGRELFEDCLMGILK--DKTVLYVTHQVEFLPAADLILVMQNGRVMQAGKFEEL--- 424

  Fly  1057 QPRITAEWNAIIAMAKAKNDNPSQNPGEKTAGERWKLLKNVSKLGLQRSISVTMDANVACHADAI 1121
                                                                             
plant   425 ----------------------------------------------------------------- 424

  Fly  1122 DGSGCISVANMQSNVVEEDDQVSVSYPIGNASCGGFNLQRKRSSIYGSRHLMYDVPLPIDECQGD 1186
                      ::.|:                   ||.:                    :.:|   
plant   425 ----------LKQNI-------------------GFEV--------------------LTQC--- 437

  Fly  1187 DVIMRPRRRHTLGRRGSRNTNSSHRLSGLSTLTATSESSSISGDVLSRSVLATSCSSYAESSVDG 1251
                                :|.|.:|                                      
plant   438 --------------------DSEHNIS-------------------------------------- 444

  Fly  1252 GDLATAAPEPRVQSWQPPQHVTHHQPLSRNASSPPAMEVANPDVKKSEEARRSNTSSESPLDDHV 1316
                                                                             
plant   445 ----------------------------------------------------------------- 444

  Fly  1317 RGSFQQFLRRMSMRRSNKPKNHHHPLSATNSILSISEESPPVVHFPASILATDGNKNETQSEEKP 1381
                                                               |:..|.|       
plant   445 ---------------------------------------------------TENKKKE------- 451

  Fly  1382 KKCVNIDSKETTINCDDNCYSASDKELRANVTSSPADQEQHNERHVLAEVAGESGRESMPLARLA 1446
                                                                         |:|.
plant   452 -------------------------------------------------------------AKLV 455

  Fly  1447 IDTERKYGKISDDIYLMYIRAAGLPIITIFFITA-LIWQCLRVYTDIWLQQWSNVHGRVASK--- 1507
            .|.|.:.|.|..::||.|:......::..|.|.| ..:|.|::.::.|:...:........|   
plant   456 QDEETEKGVIGKEVYLTYLTTVKGGLLVPFIILAQSCFQMLQIASNYWMAWTAPPTAESIPKLGM 520

  Fly  1508 GHVVLHPSEQDHEVTYYFRMYAAISCVCIIMALVSTPAGQYAGCNARRNLHDKLLQTILHKTLHF 1572
            |.::|           .:.:.||.|.:|::...:....|   |.:.......::|.:|....:.:
plant   521 GRILL-----------VYALLAAGSSLCVLARTILVAIG---GLSTAETFFSRMLCSIFRAPMSY 571

  Fly  1573 FQVTPLGRIVNRFSNDMAVIDKKIAATGQRL--LQFTLLCLSAILINVTITPW-ILVLTLPICGA 1634
            |..||.|||:||.|.|.:|:|.::|.   :|  ..|:::.:...:..::...| :.|:.:|:..|
plant   572 FDSTPTGRILNRASTDQSVLDLEMAV---KLGWCAFSIIQIVGTIFVMSQVAWQVCVIFIPVAVA 633

  Fly  1635 YYLIQKFYRCSARELQRIENATNSPVISHLSETIQGVTTIRAFNQQTRFTEILFKRLEANTIAYA 1699
            ....|::|..:.|||.|:.....:|::.|.:|::.|.||||||:|:.||.......:::::..:.
plant   634 CVFYQRYYTPTERELSRMSGVERAPILHHFAESLAGATTIRAFDQRDRFISSNLVLIDSHSRPWF 698

  Fly  1700 LLNTSHRWLGVSLDYLGGCIVFVATVTALTAASVSCRRHYEATTSPSASASPSPFETYAVTKSPS 1764
            .:.::..||...|:.|.. .||..::..|             .|.|....               
plant   699 HVASAMEWLSFRLNLLSH-FVFAFSLVLL-------------VTLPEGVI--------------- 734

  Fly  1765 ELRPSPSLVGLAINYTLLVPIYLNWVVKLLADMEMYAGSVERIAHYAQGQDADADADADADADVD 1829
                :||:.||.:.|.|.:.:....|:..:.:.|....|||||..:::       ..::|...:|
plant   735 ----NPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVERILQHSK-------IPSEAPLVID 788

  Fly  1830 ADLDHEPSSNEDVSAEVDRSSQSDAGDKVYPGATTAAGDVDEDGDQQRIGGARGGGGDCGYRQGH 1894
               |..|..|                                                       
plant   789 ---DQRPLDN------------------------------------------------------- 795

  Fly  1895 ENGAEANADKLNAGNVTGDGNHLNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQDDKDKKVVLP 1959
                                                                             
plant   796 ----------------------------------------------------------------- 795

  Fly  1960 NEPARKLERYQSVPISWPQRGDIHFDNVSLRYEGQKQNVISNLTLKIPAGQRIGICGRTGSGKSS 2024
                            ||..|.|.|.::.:||......|:.|:|...|.|::||:.||||||||:
plant   796 ----------------WPNVGSIVFRDLQVRYAEHFPAVLKNITCAFPGGKKIGVVGRTGSGKST 844

  Fly  2025 LGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRTRLSIIPQDVHLFNATIRENLDPHGYFQDLQLW 2089
            |..:||.:::.:.|.|.||:|||.:|...:||:||.|||||..||:.|||.||||...:.|.::|
plant   845 LIQALFRIVEPSHGTIVIDNVDITKIGLHDLRSRLGIIPQDNALFDGTIRLNLDPLAQYTDREIW 909

  Fly  2090 NCLELAQLKEFVNGHLPLGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLDEATSVLDSST 2154
            ..|:..||.:.:... ...||..:.:.|.|.|.|.|||:||.|.:|:.|..|||||||:.:||:|
plant   910 EALDKCQLGDVIRAK-DEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSAT 973

  Fly  2155 ESALLKAADLAFRGRTIITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQLEGSVFRGLLEK 2218
            :..:.|..:..|:.||::|||||:.|:::.|.::||..|||.|..:|.:|.|.|.|.|..|:::
plant   974 DGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKE 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 ABC_6TM_SUR1_D1_like 301..682 CDD:350035 59/202 (29%)
TM helix 1 301..324 CDD:350035
TM helix 2 385..433 CDD:350035
TM helix 3 480..525 CDD:350035 10/34 (29%)
TM helix 4 526..575 CDD:350035 12/51 (24%)
TM helix 5 587..631 CDD:350035 16/51 (31%)
TM helix 6 648..681 CDD:350035 10/32 (31%)
ABCC_MRP_domain1 837..1043 CDD:213217 83/212 (39%)
ABC_6TM_SUR1_D2_like 1475..1811 CDD:350046 77/342 (23%)
TM helix 1 1475..1496 CDD:350046 6/21 (29%)
TM helix 2 1520..1568 CDD:350046 8/47 (17%)
TM helix 3 1575..1620 CDD:350046 14/46 (30%)
TM helix 4 1621..1670 CDD:350046 13/49 (27%)
TM helix 5 1682..1727 CDD:350046 8/44 (18%)
TM helix 6 1777..1810 CDD:350046 9/32 (28%)
ABCC_MRP_domain2 1980..2201 CDD:213211 95/220 (43%)
ABCC15NP_191656.2 MRP_assoc_pro <1..1032 CDD:188098 363/1747 (21%)
Blue background indicates that the domain is not in the aligned region.

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