DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and ABCC3

DIOPT Version :10

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_187915.1 Gene:ABCC3 / 820496 AraportID:AT3G13080 Length:1514 Species:Arabidopsis thaliana


Alignment Length:2199 Identity:466/2199 - (21%)
Similarity:743/2199 - (33%) Gaps:869/2199 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LNYLVVIGSGELW--------NALFSTLLTLMLML--------YHRM--VERKKATVFLYASTAV 156
            ||.:::..||..|        ..|.|:|..|:.|:        .||.  .|.|||. ||.....|
plant    93 LNLVLMSLSGFYWYESGWLDNEQLVSSLGFLLGMVSWGVLSICLHRCRDCEHKKAP-FLLRLWLV 156

  Fly   157 EALTFALLSNELFELVRYEDFLELQTCLVAMSAMCMVSLAMLDGLTVYKECYHDDYLDDYG---- 217
            ..|..:..| .:.:.|.||....:...|:....:..::...|..:.|.|:    |..:..|    
plant   157 FYLVVSCYS-LVVDFVMYERRETVPVHLLVFDIVAFIAAVFLGYVAVLKK----DRSNSNGVLEE 216

  Fly   218 --------KIGYKHSM----------ATFYSKS------CFWWLTPLLWLGYKEPLELEDLGQMK 258
                    ::|...|:          ||.||::      .|.|::||:.:|.|:.|:|||:.|:.
plant   217 PLLNGGDSRVGGDDSVELNKTNGSGEATPYSRAGILSLLTFSWMSPLIDIGNKKTLDLEDVPQLH 281

  Fly   259 LEDSARSHYDHFLYIYTEKKKKSNSSPSLW----YCYIKNSWQMFALGGILKLAGDLFALI---- 315
            ..||.......|..:.........|..:.:    ..|....|::        |....||.|    
plant   282 DTDSVVGLAPKFRSMLESPDGGERSGVTTFKLIKALYFTAQWEI--------LVTAFFAFIYTVA 338

  Fly   316 ---GPLAIQKIVEYIEQLYAQASEPPAKSPGNEVANVLLSTSRILGTEFDEVFGTNIDKVRIYSS 377
               ||..|...|:|:.          .:...|....||:                          
plant   339 SYVGPALIDTFVQYLN----------GRRQYNHEGYVLV-------------------------- 367

  Fly   378 TWSDLLANGWCIAWIVLLAAITQGALSQASTHI-LNMTGIRIKTSLQGLIYRKSLLLNADGGCDS 441
                          |...||.....|||..... |...|||::::|..:||.|.|.|:    |.|
plant   368 --------------ITFFAAKIVECLSQRHWFFRLQKVGIRMRSALVAMIYEKGLTLS----CQS 414

  Fly   442 SDSAGQVQSTSSTSDEKQKNDDSMATPEHVDNPSEPNISHDIGSITNHMTEDTRNIMEFFLIIHY 506
            .      |..:|                              |.|.|.||.|...|..|...:|.
plant   415 K------QGRTS------------------------------GEIINFMTVDAERIGNFSWYMHD 443

  Fly   507 AWAIPFKIAVVIYLLYMNLGISAVIGSIACIVIMTPLQFFIGNAMSKNAEVIAGYTDERLKRIHD 571
            .|.:..::.:.:::||.|||::::...:|.|::|. :.|..|....:..|.:....|.|:|...:
plant   444 PWMVLLQVGLALWILYRNLGLASIAALVATIIVML-INFPFGRMQERFQEKLMEAKDSRMKSTSE 507

  Fly   572 TLVGIKVIKLNAWDEVFLKKIQEARRKELKYLNK--------DATFW---TLMAVLTHIATVLIT 625
            .|..::::||..|:..||.||.:.|:.|..:|.|        ...||   ||::|.|..|.:|  
plant   508 ILRNMRILKLQGWEMKFLSKIFDLRKSEEGWLKKYVYNSAVISFVFWGAPTLVSVSTFGACIL-- 570

  Fly   626 FVTLGVYVWLHRDQEFDLNASRLFSSLALFQQLTVPLLIFPITVPIIIAARVSTRRLERFLKSSE 690
               ||:          .|.:.::.|:||.|:.|..|:...|.|:.:|:..:||..||..:|    
plant   571 ---LGI----------PLESGKILSALATFRILQEPIYNLPDTISMIVQTKVSLDRLASYL---- 618

  Fly   691 IQKQFEGIRNMARILSKSDASLDMYETQEKSNMTMRTAQAENRLNEKRLAQKSQTPELATNSTPL 755
                                                                             
plant   619 ----------------------------------------------------------------- 618

  Fly   756 LQNAEESAEDISPSTVQELGHNKLVQQRRELLRNTPYVAIRPPKMRGSVMERPVEFSVIRARNTD 820
                  ..:::.|..|:.|                       ||  ||                 
plant   619 ------CLDNLQPDIVERL-----------------------PK--GS----------------- 635

  Fly   821 SWRRDSLLLKMPDDIAVSINDGLFTWQPQSQMPVVQLHVPGIIVPKGKLTIVVGKNGSGKTSLLS 885
                        .|:||.:.:...:|...|..|.:: .:...:.| |....|.|..||||:||||
plant   636 ------------SDVAVEVINSTLSWDVSSSNPTLK-DINFKVFP-GMKVAVCGTVGSGKSSLLS 686

  Fly   886 ALLMEMPLLAGNMFWHKTC-TISYVSQQPWLLNDTIRENILFGESFRPKRYDFVLEACALKPDIE 949
            :||.|:|.::|::   |.| |.:||:|.||:.:..|.:|||||:....:|||.|||||:|..|:|
plant   687 SLLGEVPKVSGSL---KVCGTKAYVAQSPWIQSGKIEDNILFGKPMERERYDKVLEACSLSKDLE 748

  Fly   950 LMPRGDLSIIGERGINISGGQRQRIAIARAIYSSANVVIMDDPLASLDNEVGEHIFQHCIREMLQ 1014
            ::..||.::|||||||:||||:|||.||||:|..|::.:.|||.:::|...|.|:|:..:..:| 
plant   749 ILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL- 812

  Fly  1015 KSNRTFILVTQQLHRIKEAEYLIAIKDGRVEACGSYADIELMQPRITAEWNAIIAMAKAKNDNPS 1079
             .:::.|.||.|:..:..|:.::.:||||:...|.|.||                          
plant   813 -CSKSVIYVTHQVEFLPAADLILVMKDGRISQAGKYNDI-------------------------- 850

  Fly  1080 QNPGEKTAGERWKLLKNVSKLGLQRSISVTMDANVACHADAIDGSGCISVANMQSNVVEEDDQVS 1144
                 ..:|..:..|                   :..|.:|:             .||:..|..|
plant   851 -----LNSGTDFMEL-------------------IGAHQEAL-------------AVVDSVDANS 878

  Fly  1145 VSYPIGNASCGGFNLQRKRSSIYGSRHLMYDVPLPIDECQGDDVIMRPRRRHTLGRRGSRNTNSS 1209
            ||                ..|..|..:::....:.:||                           
plant   879 VS----------------EKSALGQENVIVKDAIAVDE--------------------------- 900

  Fly  1210 HRLSGLSTLTATSESSSISGDVLSRSVLATSCSSYAESSVDGGDLATAAPEPRVQSWQPPQHVTH 1274
                       ..||..:..|                               :::|.:|.:.:  
plant   901 -----------KLESQDLKND-------------------------------KLESVEPQRQI-- 921

  Fly  1275 HQPLSRNASSPPAMEVANPDVKKSEEARRSNTSSESPLDDHVRGSFQQFLRRMSMRRSNKPKNHH 1339
                                                                             
plant   922 ----------------------------------------------------------------- 921

  Fly  1340 HPLSATNSILSISEESPPVVHFPASILATDGNKNETQSEEKPKKCVNIDSKETTINCDDNCYSAS 1404
                       |.||                                                  
plant   922 -----------IQEE-------------------------------------------------- 925

  Fly  1405 DKELRANVTSSPADQEQHNERHVLAEVAGESGRESMPLARLAIDTERKYGKISDDIYLMYIRAA- 1468
                                                         ||:.|.::.|:|..||..| 
plant   926 ---------------------------------------------EREKGSVALDVYWKYITLAY 945

  Fly  1469 GLPIITIFFITALIWQCLRVYTDIWLQQWSNVHGRVASKGHVVLHPSEQDHE---------VTYY 1524
            |..::....:..:::|.|::.::.|: .|:.              |..:|.:         :.|.
plant   946 GGALVPFILLGQVLFQLLQIGSNYWM-AWAT--------------PVSEDVQAPVKLSTLMIVYV 995

  Fly  1525 FRMYAAISCVCIIMALVSTPAGQYAGCNARRNLHDKLLQTILHKTLHFFQVTPLGRIVNRFSNDM 1589
            ...:.:..|:.:...|:.|     ||......|..|:...|....:.||..||.|||::|.|.|.
plant   996 ALAFGSSLCILLRATLLVT-----AGYKTATELFHKMHHCIFRSPMSFFDSTPSGRIMSRASTDQ 1055

  Fly  1590 AVIDKKIAATGQRLLQF-----TLLCLSAILINVTITPWILVLT-LPICGAYYLIQKFYRCSARE 1648
            :.:|.::.      .||     |::.|..|:..::...|::.|. :|:..|....|::|..:|||
plant  1056 SAVDLELP------YQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASIWYQRYYIAAARE 1114

  Fly  1649 LQRIENATNSPVISHLSETIQGVTTIRAFNQQTRFTEILFKRLEANTIAYALLNTSHRWLGVSLD 1713
            |.|:.....:|:|.|.||||.|.||||:|:|:.||.....:..:..:........:..||...||
plant  1115 LSRLVGVCKAPLIQHFSETISGATTIRSFSQEFRFRSDNMRLSDGYSRPKFYTAGAMEWLCFRLD 1179

  Fly  1714 YLGGCIVFVATVTALTAASVSCRRHYEATTSPSASASPSPFETYAVTKSPSELRPSPSLVGLAIN 1778
            .|.. :.||.::..|.:                       ..|..:         .|||.|||:.
plant  1180 MLSS-LTFVFSLVFLVS-----------------------IPTGVI---------DPSLAGLAVT 1211

  Fly  1779 YTLLVPIYLNWVVKLLADMEMYAGSVERIAHYAQGQDADADADADADADVDADLDHEPSSNEDVS 1843
            |.|.:.....|::..|.::|....|||||..||.                      .||      
plant  1212 YGLSLNTLQAWLIWTLCNLENKIISVERILQYAS----------------------VPS------ 1248

  Fly  1844 AEVDRSSQSDAGDKVYPGATTAAGDVDEDGDQQRIGGARGGGGDCGYRQGHENGAEANADKLNAG 1908
                                                                             
plant  1249 ----------------------------------------------------------------- 1248

  Fly  1909 NVTGDGNHLNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQDDKDKKVVLPNEPARKLERYQSVP 1973
                        .||.                               |:..|.|.:         
plant  1249 ------------EPPL-------------------------------VIESNRPEQ--------- 1261

  Fly  1974 ISWPQRGDIHFDNVSLRYEGQKQNVISNLTLKIPAGQRIGICGRTGSGKSSLGLSLFGVLQTTRG 2038
             |||.||::...::.:||......|:..:|.....|.|.||.||||||||:|..:||.:::.:.|
plant  1262 -SWPSRGEVEIRDLQVRYAPHMPLVLRGITCTFKGGLRTGIVGRTGSGKSTLIQTLFRIVEPSAG 1325

  Fly  2039 HIYIDDVDIQRIRPDELRTRLSIIPQDVHLFNATIRENLDPHGYFQDLQLWNCLELAQLKEFVNG 2103
            .|.||.|:|..|...:||.||||||||..:|..|:|.||||...:.|.|:|..|:..||.:.|. 
plant  1326 EIRIDGVNILTIGLHDLRLRLSIIPQDPTMFEGTMRSNLDPLEEYTDDQIWEALDKCQLGDEVR- 1389

  Fly  2104 HLPLGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLDEATSVLDSSTESALLKAADLAFRG 2168
            .....||:.:.:.|.|.|.|.|||:||.|.:|:.|..|||||||:.:|::|::.:.|.....|..
plant  1390 KKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSD 1454

  Fly  2169 RTIITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQLEGSVFRGLLEKGASK 2222
            .|:||||||:::::|.|.:::|..|.|.|...|..|.:.:.|.|..|:.:..|:
plant  1455 CTVITIAHRISSVIDSDMVLLLSNGIIEEYDTPVRLLEDKSSSFSKLVAEYTSR 1508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 ABC_6TM_SUR1_D1_like 301..682 CDD:350035 90/399 (23%)
TM helix 1 301..324 CDD:350035 7/29 (24%)
TM helix 2 385..433 CDD:350035 15/48 (31%)
TM helix 3 480..525 CDD:350035 12/44 (27%)
TM helix 4 526..575 CDD:350035 11/48 (23%)
TM helix 5 587..631 CDD:350035 17/54 (31%)
TM helix 6 648..681 CDD:350035 11/32 (34%)
ABCC_MRP_domain1 837..1043 CDD:213217 83/206 (40%)
ABC_6TM_SUR1_D2_like 1475..1811 CDD:350046 83/350 (24%)
TM helix 1 1475..1496 CDD:350046 3/20 (15%)
TM helix 2 1520..1568 CDD:350046 9/56 (16%)
TM helix 3 1575..1620 CDD:350046 14/49 (29%)
TM helix 4 1621..1670 CDD:350046 18/49 (37%)
TM helix 5 1682..1727 CDD:350046 9/44 (20%)
TM helix 6 1777..1810 CDD:350046 10/32 (31%)
ABCC_MRP_domain2 1980..2201 CDD:213211 89/220 (40%)
ABCC3NP_187915.1 MRP_assoc_pro 115..1499 CDD:188098 458/2166 (21%)

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