DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur and Abcb8

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_083296.2 Gene:Abcb8 / 74610 MGIID:1351667 Length:717 Species:Mus musculus


Alignment Length:482 Identity:124/482 - (25%)
Similarity:214/482 - (44%) Gaps:75/482 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1766 LRPSPSLVGLAINYTLLVP---IYLNWVVKLLADMEMYAGS-VERIAHYAQGQDADADADAD--- 1823
            ||....::|..::.::|.|   :.|..|...|..:....|| :.:::...|.|.|.|...||   
Mouse   256 LRSCTQVIGSLVSLSMLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEAL 320

  Fly  1824 ADADVDADLDHEPSSNEDVSAEVD----RSSQSDAGDKVYPGATTAAGDVDEDGDQQRIGGARGG 1884
            .:.........|....|...||::    ::.:...|..::.|.:..|.:....| ...|||:   
Mouse   321 GNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIALFQGLSNIAFNCMVLG-TLFIGGS--- 381

  Fly  1885 GGDCGYRQGHENGAEANADKLNAGNVTGDGNHLNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQ 1949
                                |.||.....|:.::|    ..|...|:::....||:..       
Mouse   382 --------------------LVAGQQLKGGDLMSF----LVASQTVQRSMASLSVLFG------- 415

  Fly  1950 DDKDKKVVLPNEPARKLERYQS----VPISW----PQ---RGDIHFDNVSLRYEGQKQ-NVISNL 2002
                 :||.......::..|.:    :|::.    |.   ||.|.|.||:..|..:.. ||:.:.
Mouse   416 -----QVVRGLSAGARVFEYMALSPVIPLTGGYCIPNKDIRGSITFQNVTFSYPCRPGFNVLKDF 475

  Fly  2003 TLKIPAGQRIGICGRTGSGKSSLGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRTR-LSIIPQDV 2066
            |||:|:|:.:.:.|::|.||:::...|........|.:.:|..|::.:.|..||.: :..|.|:.
Mouse   476 TLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEP 540

  Fly  2067 HLFNATIREN-----LDPHGYFQDLQLWNCLELAQLKEFVNGHLPLGLDTVICDGGLNLSAGHRQ 2126
            .||..||.||     ||.    .|.:::.....|...||::. .|.|..||:.:.|..||.|.:|
Mouse   541 VLFATTIMENIRFGKLDA----SDEEVYTAAREANAHEFISS-FPDGYSTVVGERGTTLSGGQKQ 600

  Fly  2127 LLCLARAILRGSVCLVLDEATSVLDSSTESALLKAADLAFRGRTIITIAHRLTTILDYDRLIVLD 2191
            .|.:|||:::....|:||||||.||:.:|..:.:|.|.|..|||::.|||||:|:.....:||:.
Mouse   601 RLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMA 665

  Fly  2192 QGRIVEDGNPRELQQLEGSVFRGLLEK 2218
            .|::.|.|...||.: :|.::..|:.:
Mouse   666 NGQVCEAGTHEELLK-KGGLYSELIRR 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
Abcb8NP_083296.2 MdlB 116..695 CDD:224055 124/482 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..717
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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