DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and ABCB4

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:XP_011514610.3 Gene:ABCB4 / 5244 HGNCID:45 Length:1384 Species:Homo sapiens


Alignment Length:1451 Identity:254/1451 - (17%)
Similarity:446/1451 - (30%) Gaps:633/1451 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   832 PDDIA--VSINDGLFTWQPQSQMPVVQ-LHVPGIIVPKGKLTIVVGKNGSGKTSLLSAL------ 887
            ||.|.  :..||..|::..::.:.::: |::.   |..|:...:||.:|.||::.:..:      
Human   477 PDSIKGNLEFNDVHFSYPSRANVKILKGLNLK---VQSGQTVALVGSSGCGKSTTVQLIQRLYDP 538

  Fly   888 -------------------LMEMPLLAGNMFWHKTCTISYVSQQPWLLNDTIRENILFGES---- 929
                               |.|:              |..|||:|.|.:.||.|||.:|..    
Human   539 DEGTINIDGQDIRNFNVNYLREI--------------IGVVSQEPVLFSTTIAENICYGRGNVTM 589

  Fly   930 -------FRPKRYDFVLEACALKPDIELMPRGDLSIIGERGINISGGQRQRIAIARAIYSSANVV 987
                   .....|:|:::          :|:...:::||||..:||||:||||||||:..:..::
Human   590 DEIKKAVKEANAYEFIMK----------LPQKFDTLVGERGAQLSGGQKQRIAIARALVRNPKIL 644

  Fly   988 IMDDPLASLDNEVGEHIFQHCIREMLQKS--NRTFILVTQQLHRIKEAEYLIAIKDGRVEACGSY 1050
            ::|:..::||.|....     ::..|.|:  .||.|::..:|..::.|:.:...:||.:...||:
Human   645 LLDEATSALDTESEAE-----VQAALDKAREGRTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSH 704

  Fly  1051 ADIELMQPRITAEWNAIIAMAKAKNDNPSQNPGEKTAGERWKLLKNVSKLGLQRSISVTMDANVA 1115
            :  |||                            |..|..:||: |:...|.|            
Human   705 S--ELM----------------------------KKEGVYFKLV-NMQTSGSQ------------ 726

  Fly  1116 CHADAIDGSGCISVANMQSNVVEEDDQVSVSYPIGNASCGGFNLQRKRSSIYGSRHLMYDVPLPI 1180
                            :||...|.:|:.:.:                |.:..|.:..::      
Human   727 ----------------IQSEEFELNDEKAAT----------------RMAPNGWKSRLF------ 753

  Fly  1181 DECQGDDVIMRPRRRHTLGRRGSRNTNSSHRLSGLSTLTATSESSSISGDVLSRSVLATSCSSYA 1245
                          ||:.    .:|..:|.                             .|....
Human   754 --------------RHST----QKNLKNSQ-----------------------------MCQKSL 771

  Fly  1246 ESSVDGGDLATAAPEPRVQSWQPPQHVTHHQPLSRNASSPPAMEVANPDVKKSEEARRSNTSSES 1310
            :...||                            ..|:.||.                       
Human   772 DVETDG----------------------------LEANVPPV----------------------- 785

  Fly  1311 PLDDHVRGSFQQFLRRMSMRRSNKPKNHHHPLSATNSILSISEE--SPPVVHFPASILATDGNKN 1373
                       .||:.:.:.::      ..|.....::.:|:..  .|......:.|:|..|..:
Human   786 -----------SFLKVLKLNKT------EWPYFVVGTVCAIANGGLQPAFSVIFSEIIAIFGPGD 833

  Fly  1374 ETQSEEKPKKCVNIDSKETTINCDDNCYSASDKELRANVTSSPADQEQHNERHVLAEVAGESGRE 1438
            :.   .|.:||              |.:|.                                   
Human   834 DA---VKQQKC--------------NIFSL----------------------------------- 846

  Fly  1439 SMPLARLAIDTERKYGKISDDIYLMYIRAAGLPIITIFFITALIWQCLRVYTDIWLQQWSNVHGR 1503
                                 |:|.      |.||:.|                           
Human   847 ---------------------IFLF------LGIISFF--------------------------- 857

  Fly  1504 VASKGHVVLHPSEQDHEVTYYFRMYAAISCVCIIMALVSTPAGQYAGCNARRNLHDKLLQTILHK 1568
                              |::.:.:.               .|: ||....|.|.....:.:|.:
Human   858 ------------------TFFLQGFT---------------FGK-AGEILTRRLRSMAFKAMLRQ 888

  Fly  1569 TLHFF--QVTPLGRIVNRFSNDMAVIDKKIAATGQR--LLQFTLLCLSAILINVTITPWILVLTL 1629
            .:.:|  .....|.:..|.:.|.|.:.   .|||.|  |:...:..|...:|...|..|.|.|.|
Human   889 DMSWFDDHKNSTGALSTRLATDAAQVQ---GATGTRLALIAQNIANLGTGIIISFIYGWQLTLLL 950

  Fly  1630 ----PICGAYYLIQ-KFYRCSA-RELQRIENATNSPVISHLSETIQGVTTIRAFNQQTRFTEILF 1688
                ||.....::: |....:| |:.:.:|.|...     .:|.|:.:.|:.:..|:.:|..:..
Human   951 LAVVPIIAVSGIVEMKLLAGNAKRDKKELEAAGKI-----ATEAIENIRTVVSLTQERKFESMYV 1010

  Fly  1689 KRLEANTIAYALLNTSHRWLGVSLDYLGGCIVFVATVTALTAASVSCRRHYEATTSPSASASPSP 1753
            ::|      |.....|     |...::.| |.|..:...:..:...|.|                
Human  1011 EKL------YGPYRNS-----VQKAHIYG-ITFSISQAFMYFSYAGCFR---------------- 1047

  Fly  1754 FETYAVTKSPSELRPSPSLVGLAINYTLLVPIYLNWVVKLLADMEMYAGSVERIAHYAQGQDADA 1818
            |..|.:.......| ...||..||.:                      |:| .:.|      |.:
Human  1048 FGAYLIVNGHMRFR-DVILVFSAIVF----------------------GAV-ALGH------ASS 1082

  Fly  1819 DADADADADVDAD-----LDHEPSSNEDVSAEVDRSSQSDAGDKVYPGATTAAGDVDEDGDQQRI 1878
            .|...|.|.:.|.     .:.:|.        :|  |.|:.|.|                     
Human  1083 FAPDYAKAKLSAAHLFMLFERQPL--------ID--SYSEEGLK--------------------- 1116

  Fly  1879 GGARGGGGDCGYRQGHENGAEANADKLNAGNVTGDGNHLNFHHPPATAGDKVEQATTKTSVIKDK 1943
                                   .||.. ||:|                                
Human  1117 -----------------------PDKFE-GNIT-------------------------------- 1125

  Fly  1944 QLPPQQDDKDKKVVLPNEPARKLERYQSVPISWPQRGDIHFDNVSLRYEGQKQNVISNLTLKIPA 2008
                                     :..|..::|.|.::              .|:..|:|::..
Human  1126 -------------------------FNEVVFNYPTRANV--------------PVLQGLSLEVKK 1151

  Fly  2009 GQRIGICGRTGSGKSSLGLSLFGVLQTTRGHIYI-------DDVDIQRIRPDELRTRLSIIPQDV 2066
            ||.:.:.|.:|.|||::...|........|.:::       |..:.:::....||.:|.|:.|:.
Human  1152 GQTLALVGSSGCGKSTVVQLLERFYDPLAGTVFVDFGFQLLDGQEAKKLNVQWLRAQLGIVSQEP 1216

  Fly  2067 HLFNATIRENLDPHGYFQDLQLWNCLELAQLKEFVNGH-----LPLGLDTVICDGGLNLSAGHRQ 2126
            .||:.:|.||:   .|..:.::.:..|:....:..|.|     ||...:|.:.|.|..||.|.:|
Human  1217 ILFDCSIAENI---AYGDNSRVVSQDEIVSAAKAANIHPFIETLPHKYETRVGDKGTQLSGGQKQ 1278

  Fly  2127 LLCLARAILRGSVCLVLDEATSVLDSSTESALLKAADLAFRGRTIITIAHRLTTILDYDRLIVLD 2191
            .:.:|||::|....|:||||||.||:.:|..:.:|.|.|..|||.|.|||||:||.:.|.::|..
Human  1279 RIAIARALIRQPQILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQ 1343

  Fly  2192 QGRIVEDGNPRELQQLEGSVF 2212
            .||:.|.|..::|...:|..|
Human  1344 NGRVKEHGTHQQLLAQKGIYF 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
ABCB4XP_011514610.3 AAA 108..1369 CDD:333001 254/1451 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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