DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and Tap2

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_114445.2 Gene:Tap2 / 24812 RGDID:3818 Length:703 Species:Rattus norvegicus


Alignment Length:849 Identity:170/849 - (20%)
Similarity:298/849 - (35%) Gaps:284/849 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1401 YSASDKELRANVTSSPADQEQHNERHVLAEVAGESGRESMPLARLAIDTERKYGKISDDIYLMYI 1465
            |.|:...|......|||..::       .|...|:.|..|                   |.|:.:
  Rat   106 YVAAALSLAVWAVLSPAGAQE-------KEPGQENNRALM-------------------IRLLRL 144

  Fly  1466 RAAGLPIITIFFITALIWQCLRVYTDIWLQQWSNVHGRVASKGHVVLHPSEQDHEVTYYFRMYAA 1530
            ....||    |.|.|.|:..:.|:.:..:..:|   |||     :.:...:.|.:         |
  Rat   145 SKPDLP----FLIVAFIFLAMAVWGETLIPHYS---GRV-----IDILGGDFDPD---------A 188

  Fly  1531 ISCVCIIMALVSTPAGQYAGCN--------ARRNL--HDKLLQTILHKTLHFFQVTPLGRIVNRF 1585
            .:.....|.|.|..:...|||.        :|.||  .::|..::|.:.|.|||.|..|.:.:|.
  Rat   189 FASAIFFMCLFSVGSSLSAGCRGGSFLFTMSRINLRIREQLFSSLLRQDLAFFQETKTGELNSRL 253

  Fly  1586 SNDMAVIDKKIAATGQRLLQFTLLCLSAILINVTITP---WILVLTLPICGAYYLIQKFY----R 1643
            |:|.:::.:.:......||:..:..:......:.::|   ::.:|.||:..|   .:|.|    :
  Rat   254 SSDTSLMSRWLPFNANILLRSLVKVVGLYYFMLQVSPRLTFLSLLDLPLTIA---AEKVYNPRHQ 315

  Fly  1644 CSARELQRIENATNSPVISHLSETIQGVTTIRAFNQQTRFTEILFKRLEANTIAYALLNTSHRWL 1708
            ...:|:|.:.......|    .|.:.|:.|:|:|..:.:         |.:....||......| 
  Rat   316 AVLKEIQDVVAKAGQVV----REAVGGLQTVRSFGAEEQ---------EVSRYKEALERCRQLW- 366

  Fly  1709 GVSLDYLGGCIVFVATVTALTAASVSCRRHYEATTSPSASASPSPFETYAVTKSPSELRPSPSLV 1773
                                      .||..|.             |.|.|.:..          
  Rat   367 --------------------------WRRDLEK-------------ELYLVIRRV---------- 382

  Fly  1774 GLAINYTLLVPIYLNWVVKLLADMEMYAGSV-------ERIAHYAQG---QDADADADADADADV 1828
             :|:...:|:   ||..|:.:...|:..|.:       |.:.|:.:.   ...|..::..|...|
  Rat   383 -MALGMQVLI---LNCGVQQILAGEVTRGGLLSFLLYQEEVGHHVRNLVYMYGDMLSNVGAAEKV 443

  Fly  1829 DADLDHEPSSNEDVSAEVDRSSQSDAGDKVYPGATTAAGDVDEDGDQQRIGGARGGGGDCGYRQG 1893
            .:.||..|:                     .|...|.|                           
  Rat   444 FSYLDRRPN---------------------LPKPGTLA--------------------------- 460

  Fly  1894 HENGAEANADKLNAGNVTGDGNHLNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQDDKDKKVVL 1958
                                        ||...| :||                           
  Rat   461 ----------------------------PPRVEG-RVE--------------------------- 469

  Fly  1959 PNEPARKLERYQSVPISWPQRGDIHFDNVSLRYEGQKQNVISNLTLKIPAGQRIGICGRTGSGKS 2023
                      :|.|..|:|.|              .::.|:..||..:..|:...:.|..|||||
  Rat   470 ----------FQDVSFSYPSR--------------PEKPVLQGLTFTLHPGKVTALVGPNGSGKS 510

  Fly  2024 SLGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRTRLSIIPQDVHLFNATIRENLDPHGY--FQDL 2086
            ::...|..:.|.|.|.:.:|...:.:.....|..::.::.|:..||:.::::|: .:|.  .:|.
  Rat   511 TVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHRQVVLVGQEPVLFSGSVKDNI-AYGLRNCEDA 574

  Fly  2087 QLWNCLELAQLKEFVNGHLPLGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLDEATSVLD 2151
            |:....:.|...:|: |.:..|::|.|.:.|..|:.|.:|.|.:|||::|....|:||||||.||
  Rat   575 QVMAAAQAACADDFI-GEMTNGINTEIGERGSQLAVGQKQRLAIARALVRNPRVLILDEATSALD 638

  Fly  2152 SSTESALLKAADLAFRG---RTIITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQLEGSVFR 2213
            :..|.||     ..:|.   ||::.|||||.|:.:.|:::||.||::||....|:.|.:...:.:
  Rat   639 AECEQAL-----QTWRSQEDRTMLVIAHRLHTVQNADQVLVLKQGQLVEHDQLRDEQDVYAHLVQ 698

  Fly  2214 GLLE 2217
            ..||
  Rat   699 QRLE 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
Tap2NP_114445.2 3a01208 1..697 CDD:273363 168/842 (20%)
ABC_membrane 156..416 CDD:279056 62/346 (18%)
P-loop_NTPase 457..680 CDD:304359 76/336 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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