DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and haf-7

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_506645.1 Gene:haf-7 / 190115 WormBaseID:WBGene00001817 Length:807 Species:Caenorhabditis elegans


Alignment Length:892 Identity:183/892 - (20%)
Similarity:318/892 - (35%) Gaps:292/892 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1370 GNKNE----TQSEEKPKKCVNIDSKETTINCDDNCYSASDKELRANVTSSPADQEQHNERHVLAE 1430
            |.|.|    .:..|..:...|.:.:..|.:.:....:|:.....::.:.|.:..|:.|:      
 Worm   144 GKKKEGAEYERLTENTETAANTNVENGTASTNGTASTATPTAATSSTSRSSSTDEEDND------ 202

  Fly  1431 VAGESGRESMPLARLAIDTERKYGKISDDIYLMYIRAAGLPIITIFFITALIWQCLRVYTDIWLQ 1495
                           |:..|.|..:              ||::|      .:||.:::.:..|  
 Worm   203 ---------------AVSKEEKEKR--------------LPLLT------HLWQIVKLCSVQW-- 230

  Fly  1496 QWSNVHGRVASKGHVVL---------HPSEQDHEVTYYFRM--YAAISCVCIIMALVS-TPAG-- 1546
            :|       .|..:|:|         .|:.....::...||  :..:...||::|.|. |.|.  
 Worm   231 KW-------FSAAYVLLFVDCILNLIEPALYSQMMSTAIRMKSFDVLKRACIVLAAVQFTEATVN 288

  Fly  1547 -------QYAGCNARRNLHDKLLQTILHKTLHFFQVTPLGRIVNRFSNDMAVIDKKIAATGQRLL 1604
                   |||.....||:...|.:.|||:.:.||.....|::::|.:.|...|...:....:..:
 Worm   289 TVRYICMQYAERLTARNIRVSLFRAILHQDISFFDDNKTGQLMSRITKDSESISNSLPVYIETTV 353

  Fly  1605 --QFTLLCLSAILINVTITPWILVL----TLPICGAYYLIQKFYRCSARELQRIENATNSPVISH 1663
              .|.|...:.|:...:   |.|.:    |.||   ..|..|||.....:|...||...:.....
 Worm   354 NNSFMLFGSAPIMFYYS---WQLAISTFVTFPI---ILLTTKFYGLIVEKLSEKENDATAVSNET 412

  Fly  1664 LSETIQGVTTIRAFNQQ-------TRFTEILFKRLEANTIAYALLNTSHRWLGVSLDYLGGCIVF 1721
            :.|.:..:.|:|:|..:       ||.|:..|| :...|:.:          |...:|      |
 Worm   413 VEEVLSAIRTVRSFAAEKIENMRYTRDTDAWFK-ISTKTVVF----------GTFFNY------F 460

  Fly  1722 VATVTALTAASVSCRRHYEATTSPSASASPSPFETYAVTKSPSELRPSPSLVGLAINYTLLVPIY 1786
            .||:..:....:..   |....:.:....|....||                   |.|...:...
 Worm   461 WATMWNIEDVIIYL---YGGYLTLNGRMEPDALLTY-------------------IFYHWRLHSA 503

  Fly  1787 LNWVVKLLADMEMYAGSVERIAHYAQGQDADADADADADADVDADLDHEPSSNEDVSAEVDRSSQ 1851
            ||....|.:|:....||..::.|.                     ::.:|        |:|    
 Worm   504 LNAFSSLFSDVMKTIGSSRKVIHI---------------------MNRQP--------ELD---- 535

  Fly  1852 SDAGDKVYPGATTAAGDVDEDGDQQRIGGARGGGGDCGYRQGHENGAEANADKLNAGNVTGDGNH 1916
                                                      :|.|.|.                
 Worm   536 ------------------------------------------YEFGTET---------------- 542

  Fly  1917 LNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQDDKDKKVVLPNEPARKLERYQSVPISWPQRGD 1981
                                                 .::|                      |:
 Worm   543 -------------------------------------PEIV----------------------GN 548

  Fly  1982 IHFDNVSLRYEGQKQ-NVISNLTLKIPAGQRIGICGRTGSGKSSLGLSLFGVLQTTR-GHIYIDD 2044
            |.|::|...|..:|. ||::.:.|.|..|:.|.:.|.:|:|||:| :||.....|.: |.|.||.
 Worm   549 IIFEDVEFAYPTRKNANVLNKINLSIDPGKTIALVGPSGNGKSTL-VSLIQQFYTPQSGRILIDG 612

  Fly  2045 VDIQRIRPDELRTRLSIIPQDVHLFNATIRENL---DPHGYFQDLQLWNCLELAQLKEFVNGHLP 2106
            ..||.|......|.::::.|:..||:.|:|||:   ..:|..:|:.  ...|:|.:.|||: .:.
 Worm   613 TPIQNIDHLHYHTNIALVAQEPTLFSGTVRENILYGLENGTDEDMM--RVAEMANVHEFVS-KME 674

  Fly  2107 LGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLDEATSVLDSSTESALLKAADLAFRGRTI 2171
            .|.||...:.|:.:|.|.:|.:.:|||::|....|:||||||.|||.:|:.:.:|.:...|.||:
 Worm   675 KGYDTKCGEKGVQMSGGQKQRIAIARALIRDPRVLILDEATSALDSESEAMVQEALNRCARERTV 739

  Fly  2172 ITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQLEGSVFRGLLEK 2218
            :.|||||:|:...||:.|:::|.:.|.||..||.:....::..|:.|
 Worm   740 LVIAHRLSTVRSADRIAVIEKGNVTEMGNHEELMKNTEGLYYKLVSK 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
haf-7NP_506645.1 3a01208 17..784 CDD:273363 181/888 (20%)
ABC_membrane 238..494 CDD:279056 60/300 (20%)
ABC_MTABC3_MDL1_MDL2 549..787 CDD:213216 85/242 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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