DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur and mrp-6

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_001362008.1 Gene:mrp-6 / 180691 WormBaseID:WBGene00003412 Length:1415 Species:Caenorhabditis elegans


Alignment Length:2085 Identity:430/2085 - (20%)
Similarity:719/2085 - (34%) Gaps:780/2085 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 VSLAMLDGLTVYKECYHDDYLDDYGKIGYKHSMATFYSKSCFWWLT------------PLLWLGY 245
            |:|..::|       ||....|..|.|    |...|.....:||.|            |...:..
 Worm    35 VNLESVEG-------YHPSSEDSAGLI----SSILFSFVGFYWWRTRNAQTDTDLLEKPSKGISA 88

  Fly   246 KEPLELEDLGQMKLED---SARSHYDHFLYIYTEKKKKSNSSPSLWYCYIKNSWQMFALGGILKL 307
            |       ....|||.   |:.....|||.             .:|:| .|.|....|:...|: 
 Worm    89 K-------YAAQKLESKWISSGPKRTHFLV-------------GVWHC-TKVSVMAHAISLCLE- 131

  Fly   308 AGDLFALIGPLAIQKIVEY--IEQLYAQASEPPAKSPGNEVANVLLSTSRILGTEFDEVFGTNID 370
              :|..:..||.:::::.|  ||:                            |.||         
 Worm   132 --ELTRVAQPLLLRELMSYYDIEE----------------------------GQEF--------- 157

  Fly   371 KVRIYSSTWSDLLANGWCIAWIVLLAAITQGALSQASTHILNMTGIRIKTSLQGLIYRKSLLLNA 435
                  ..|..:.     :|.|:.|.:.....:.....|.|...|...:.:...|:|||||.:  
 Worm   158 ------PYWPAMQ-----VALIISLLSFVTVCIHHPYFHGLLKVGNHARVATGVLLYRKSLRI-- 209

  Fly   436 DGGCDSSDSAGQVQSTSSTSDEKQKNDDSMATPEHVDNPSEPNISHDIGSITNHMTEDTRNIMEF 500
                    |...:..|:|                              |.|...:..|...:.:.
 Worm   210 --------SLTSLFETNS------------------------------GQIIQLLNTDAAKLEQA 236

  Fly   501 FLIIHYAWAIPFKIAVVIYLLYMNLGISAVIGSIACIVIMTPLQFFIGNAMSKNAEVIAGYTDER 565
            ||..||.|..|..:....|:|:...|...::|.:..:.|:: .|......:..|...|....|.|
 Worm   237 FLFAHYVWLCPLLMFFYAYILWSMFGFCCLLGFLVMMAIVS-FQVHYSYQLGVNRRNIGDKMDSR 300

  Fly   566 LKRIHDTLVGIKVIKLNAWDEVFLKKIQEARRKELKYLNKDATFWTLMAVLTHIATVLITFVTLG 630
            ||.:.:.:.||||||::.|:..|.:||:..|..|:|.:...|.:.:::..:..|:      ..:|
 Worm   301 LKVMSEIINGIKVIKMHGWENAFAEKIRILREDEIKAVGTSAFYSSMVMGIYFIS------AKIG 359

  Fly   631 VYVWLHRDQEFD--LNASRLFSSLALFQQLTVPLLIFPITVPIIIAARV--STRRLERFLKSSEI 691
            ::|::.....||  |....:|:|.|||..:.:|..:| :.:.::....:  ::||::.|....| 
 Worm   360 LFVYIFACDYFDEILTTRGVFASSALFNSVRLPFALF-LPLGLLFGRELFSTSRRIDLFFCLEE- 422

  Fly   692 QKQFEGIRNMARILSKSDASLDMYETQ-----EKSNMTMRTAQAENRLNEK-----RLAQKSQTP 746
                         .|:....||..:|:     ||..:|::      ::.||     :..:..:|.
 Worm   423 -------------YSRITLELDSTDTEDGSKNEKEGLTLK------KIGEKPSWTLKCDKAEKTS 468

  Fly   747 ELATNSTPLLQNAEESAEDISPSTVQELGHNKLVQQRRELLRNTPYVAIRPPKMRGSVMERPVEF 811
            ......|.:..:.:|..:.......:.|..|                                :.
 Worm   469 VFLNKVTAVWYDKDEHDQKKKKKNFKALSDN--------------------------------DA 501

  Fly   812 SVIRARNTDSWRRDSLLLKMPDDIAVSINDGLFTWQPQSQMPVVQLHVPGIIVPKGKLTIVVGKN 876
            :||.....|.          |..:..::.|..|.:                  ..|....::|..
 Worm   502 TVIAGEKKDE----------PLHVVYAVQDLSFEF------------------VAGTCYGIIGSV 538

  Fly   877 GSGKTSLLSALLMEMPLLAGNMFWHKTCTISYVSQQPWLLNDTIRENILFGESFRPKRYDFVLEA 941
            ||||:|||..:|.|..:..||:  ....:.:|.:|:||:...:|::||:||..|..:||:..||.
 Worm   539 GSGKSSLLLTILSESRMTRGNL--SVNGSFAYCAQEPWIFTGSIQDNIVFGSEFNKERYENALEL 601

  Fly   942 CALKPDIELMPRGDLSIIGERGINISGGQRQRIAIARAIYSSANVVIMDDPLASLDNEVGEHIFQ 1006
            |.|.||:.....||::|:|:.|..:|||||.|:|:|||:|:.|::.::||||:::|..||:.:::
 Worm   602 CLLTPDLRQFANGDMTIVGDNGSTLSGGQRARVALARAVYADADIYLLDDPLSAVDAHVGKKLYE 666

  Fly  1007 HCIREMLQKSNRTFILVTQQLHRIKEAEYLIAIKDGRVEACGSYADIELMQPRITAEWNAIIAMA 1071
            :.||..|  |::..||||.|:|.:.|.:.:|.:|:.::                           
 Worm   667 NLIRGFL--SDKLVILVTHQIHFLSELDSVILMKNNKM--------------------------- 702

  Fly  1072 KAKNDNPSQNPGEKTAGERWKLLKNVSKLGLQRSISVTMDANVACHADAIDGSGCISVANMQSNV 1136
                                                                             
 Worm   703 ----------------------------------------------------------------- 702

  Fly  1137 VEEDDQVSVSYPIGNASCGGFNLQRKRSSIYGSRHLMYDVPLPIDECQGDDVIMRPRRRHTLGRR 1201
                        :||.|                          :||.:                 
 Worm   703 ------------VGNGS--------------------------LDELK----------------- 712

  Fly  1202 GSRNTNSSHRLSGLSTLTATSESSSISGDVLSRSVLATSCSSYAESSVDGGDLATAAPEPRVQSW 1266
                                   |:.:.|.:....:.|...| .|..|||               
 Worm   713 -----------------------STFTDDFIKLQAVETEVQS-DELFVDG--------------- 738

  Fly  1267 QPPQHVTHHQPLSRNASSPPAMEVANPDVKKSEEARRSNTSSESPLDDHVRGSFQQFLRRMSMRR 1331
             ||             ||||                      .||::..            ||.:
 Worm   739 -PP-------------SSPP----------------------PSPVNIE------------SMEK 755

  Fly  1332 SNKPKNHHHPLSATNSILSISEESPPVVHFPASILATDGNKNETQSEEKPKKCVNIDSKETTINC 1396
            .||    .......||:||.|:.|                                         
 Worm   756 INK----ESIFQRANSVLSGSKMS----------------------------------------- 775

  Fly  1397 DDNCYSASDKELRANVTSSPADQEQHNERHVLAEVAGESGRESMPLARLAIDTERKYGKISDDIY 1461
                                       |...:.|:..||               ||.|.||..:|
 Worm   776 ---------------------------ETEYVKEIVYES---------------RKSGTISWSVY 798

  Fly  1462 LMYIRAA------GLPIITIFFITALIWQCLRVYTDIWLQQW------SNVHGRVASK------- 1507
            ..|.|..      |:.::    :..||.|.:..:.|.||.:|      :|.....:.:       
 Worm   799 WEYTRGVINPLKYGIWLV----VCVLITQLMNNFVDWWLNKWLVDLDMNNADNSTSKEEFNRNVD 859

  Fly  1508 --GHVVLHPSEQDHEVTYYFRMYAAISCVCI-IMALVSTPAGQYAGCNARRNLHDKLLQTILHKT 1569
              |: ..:.:.|.:|:|:      .||.|.: |:.:|.:...:.|...|.|.||:.:...:|...
 Worm   860 VLGY-TFNVTFQTYELTF------IISTVIMSILGVVRSVWFRNAQLMASRILHNSMFDCVLKTE 917

  Fly  1570 LHFFQVTPLGRIVNRFSNDMAVIDKKIAATGQRLLQFTLLCLSAILINVTITPWILVLTLPICGA 1634
            ..||.....|.|:||||.|:.:.|..:|.|....:..||..:..:.:...:.|.:::....|...
 Worm   918 SEFFDKNSEGMILNRFSKDIGLTDDLLAFTYFEFVFGTLTFVGIVGLVSMVRPIVILACAFITAG 982

  Fly  1635 YYLIQKFYRCSARELQRIENATNSPVISHLSETIQGVTTIRAFNQQTRFTEILFKRLEANTIAYA 1699
            :|..:|.|...:|||:|||.|..||:.:.::.|:.|::||||:.::....|......:....||.
 Worm   983 FYFCRKMYVHRSRELKRIEAAARSPLNTTITSTVHGLSTIRAYRKENEMIEKFCALHDVYMAAYN 1047

  Fly  1700 LLNTSHRWLGVSLDYLGGCIVFVATVTALTAASVSCRRHYEATTSPSASASPSPFETYAVTKSPS 1764
            :...|.||.|:.:|:|  ..|||:.|..:....                     :||..|.:   
 Worm  1048 MGLLSARWFGICIDFL--VSVFVSIVAIVVVLQ---------------------YETLTVGE--- 1086

  Fly  1765 ELRPSPSLVGLAINYTLLVPIYLNWVVKLLADMEMYAGSVERIAHYAQGQDADADADADADADVD 1829
                    |||.:...:.:..:.:|:::..|::|....||||:..|.:                 
 Worm  1087 --------VGLCLVCAVQLSGFFSWIMRQSAELENGMVSVERVLEYTK----------------- 1126

  Fly  1830 ADLDHEPSSNEDVSAEVDRSSQSDAGDKVYPGATTAAGDVDEDGDQQRIGGARGGGGDCGYRQGH 1894
                              ..|:.:|                                    |:.|
 Worm  1127 ------------------LKSEEEA------------------------------------RRPH 1137

  Fly  1895 ENGAEANADKLNAGNVTGDGNHLNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQDDKDKKVVLP 1959
            :                                           ...||||..            
 Worm  1138 D-------------------------------------------AYLDKQLLN------------ 1147

  Fly  1960 NEPARKLERYQSVPISWPQRGDIHFDNVSLRYEGQKQNVISNLTLKIPAGQRIGICGRTGSGKSS 2024
                           |||.:|:|.|:|||:.|...|  |:.||:..:..||:||:.||||:|||:
 Worm  1148 ---------------SWPTKGEIEFENVSVNYGETK--VLKNLSFVVLGGQKIGVVGRTGAGKST 1195

  Fly  2025 LGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRTRLSIIPQDVHLFNATIRENLDPHGYFQDLQLW 2089
            |...:||:.:...|.:.||.||:..|..:..|..:|||||:..:|:.|:||||||...:.|..:|
 Worm  1196 LIKIIFGLKEYCSGRVTIDGVDLDHISLNFRRGGMSIIPQEPVIFSGTVRENLDPFDEYDDATIW 1260

  Fly  2090 NCLELAQLKEFVNGHLPLGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLDEATSVLDSST 2154
            ..||..:||..:...  .||:..:...|::||.|.|||.|||||::..|..||:||||:.:|..|
 Worm  1261 FALEQCELKRSITKE--KGLNVELGQRGVSLSVGQRQLFCLARAMIHRSKILVIDEATANVDGVT 1323

  Fly  2155 ESALLKAADLAFRGRTIITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQLEGSVF-RGLLEK 2218
            ::.:.|.....|:..||||:||||.||::.|.::|.::|.:||...|..|...:.|:| |...:.
 Worm  1324 DACIQKTIRDFFKNATIITVAHRLHTIMNSDNVMVFEKGELVEFDKPITLLDDQSSLFSRMAAQS 1388

  Fly  2219 GASKW 2223
            ||..:
 Worm  1389 GAENF 1393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
mrp-6NP_001362008.1 MRP_assoc_pro <126..1389 CDD:188098 401/1956 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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