DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur and haf-1

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:NP_503098.2 Gene:haf-1 / 178522 WormBaseID:WBGene00001811 Length:677 Species:Caenorhabditis elegans


Alignment Length:264 Identity:78/264 - (29%)
Similarity:136/264 - (51%) Gaps:18/264 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  1963 ARKLERYQSVPISWPQRG--------DIHFDNVSLRYEGQKQNVISNLTLKIPAGQRIGICGRTG 2019
            :|.||...:.||.....|        .|.|:|||..|.|:|: .:.|::..||.|:...:.|.:|
 Worm   386 SRLLELKNAQPIMNLNSGIKKTDITTSIQFENVSFAYAGRKK-TLENISFDIPRGKITAVIGPSG 449

  Fly  2020 SGKSSLGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRTRLSIIPQDVHLFNATIRENL-----DP 2079
            |||||:...:..:.....|.:.:|.||::.:.....|..:..:.|:..||..:||||:     .|
 Worm   450 SGKSSIANLMLRLYDPADGRVTVDGVDLRDLNATTWRHAIGTVGQEPVLFTCSIRENILMGTEHP 514

  Fly  2080 HGYFQDLQLWNCLELAQLKEFVNGHLPLGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLD 2144
            ....| .:|....:||...:|:.| ...|.:|::.:.|..||.|.:|.:.:|||::.....::||
 Worm   515 EKVSQ-YELEEAAQLANALDFIQG-FENGFETMVGEHGCKLSGGQKQRIAIARALISKPKIMILD 577

  Fly  2145 EATSVLDSSTESALLKAAD--LAFRGRTIITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQL 2207
            ||||.||::::..:....|  |.....|::.|||||.|:...|:::.:::|||...|...|:.::
 Worm   578 EATSALDATSDYLIRMTLDNLLKNHNLTVLVIAHRLATMQQADQVVYVNRGRIEGQGTFDEMMKI 642

  Fly  2208 EGSV 2211
            :.|:
 Worm   643 QNSI 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
haf-1NP_503098.2 MdlB 82..641 CDD:224055 77/257 (30%)
ABC_membrane 93..363 CDD:294371
P-loop_NTPase 413..641 CDD:304359 71/230 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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