DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur and abcc12

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:XP_002937916.3 Gene:abcc12 / 100493828 XenbaseID:XB-GENE-6465370 Length:1430 Species:Xenopus tropicalis


Alignment Length:2045 Identity:476/2045 - (23%)
Similarity:762/2045 - (37%) Gaps:728/2045 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 WLTPLLWLGYK-EPLELEDLGQMKLEDSARSHYDHFLYIYTEK-----KKKSNSSPSLW-YCYIK 293
            |:|||....|| ..|::.||..:...:|:.::......::.|:     |:|::.|..|| :|..:
 Frog    45 WITPLARKAYKLSELQMNDLWSLPFHESSETNCQRLQSLWEEELQNHGKRKASLSLVLWRFCRTR 109

  Fly   294 NSWQMFALGGILKLAGDLFALIGP-LAIQKIVEYIEQLYAQASEPPAKSPGNEVANVLLSTSRIL 357
            :.....:|  |:.:..   :.||| :.|:.::||            |.:..:::...|:..|.|.
 Frog   110 SLLAFLSL--IITMTA---SFIGPAIFIRALLEY------------ANTLKHDLRYGLILASGIF 157

  Fly   358 GTEFDEVFGTNIDKVRIYSSTWSDLLANGWCIAWIVLLAAITQGALSQASTHILNMTGIRIKTSL 422
            ..|.          ||    :||  .|..|.:.:                     .||:|:|.::
 Frog   158 AAEL----------VR----SWS--FALHWAMNY---------------------RTGVRLKGAV 185

  Fly   423 QGLIYRKSLLLNADGGCDSSDSAGQVQSTSSTSDEKQKNDDSMATPEHVDNPSEPNISHDIGSIT 487
            ..|.::|.|.|                        ||.||  :.|                |.:.
 Frog   186 LALAFKKMLKL------------------------KQSND--IRT----------------GELL 208

  Fly   488 NHMTEDTRNIMEFFLIIHYAWAIPFKIAV-----VIYLLY--MNLGISAVIGSIACIVIMTPLQF 545
            |..:.|.:.:.|       |.:|...:|.     ::.|:|  :.||.||::|| :..:|..|...
 Frog   209 NMCSSDGQRLFE-------AASIGCMLAAGPVIGIMGLVYTALFLGPSALLGS-SVFIIFYPFMM 265

  Fly   546 FIGNAMSKNAEVIAGYTDERLKRIHDTLVGIKVIKLNAWDEVFLKKIQEARRKELKYLNKDATFW 610
            ......:...:.....||.|::.:::.|..||.||:.||:..|..|||:.|.:|..:|.|..   
 Frog   266 LASKLTAYFRKKCIVVTDRRVRLMNEILNSIKFIKMYAWENTFRNKIQDIRSEEKTFLEKAG--- 327

  Fly   611 TLMAVLTHIATVLITFVTLGVYVWLHRDQEFDLNASRLFSSLALFQQLTVPLLIFPITVPIIIAA 675
            .:.::.:.:|.|::...::..:. ||....::|||:..|:.:.:|..:|..|.:.|:.|.....|
 Frog   328 YVQSITSGVAPVVVVVASVCTFT-LHMALGYNLNAAEAFTVVTVFNSMTSALKMIPLAVKAASEA 391

  Fly   676 RVSTRRLERFLKSSEIQKQFEGIRNMARILS-------------KSDASLDMYETQEKSNMTMRT 727
            .:|..|.::.....|     ..:||..|:||             .||......|.|:::......
 Frog   392 SISISRFQKLFLMEE-----SDMRNNQRLLSNDLIDFSGAYFSWSSDVRSSTLEKQKEAEQKQEE 451

  Fly   728 -AQAENRLNEKRLAQKSQTPELATNSTPLLQNAEESAEDISPSTVQELGHNKLVQQRRELLRNTP 791
             .:.:|.:|...|...|::.:: .|.|    ||.|                .:|.:.:..|    
 Frog   452 FKETQNLINGHYLFSSSESKQI-VNGT----NASE----------------YIVCEHKAAL---- 491

  Fly   792 YVAIRPPKMRGSVMERPVEFSVIRARNTDSWRRDSLLLKMPDDIAVSINDGLFTWQPQSQMPVVQ 856
                                                         ::||   ||           
 Frog   492 ---------------------------------------------ININ---FT----------- 497

  Fly   857 LHVPGIIVPKGKLTIVVGKNGSGKTSLLSALLMEMPLLAGNMFWHKTCTIS----YVSQQPWLLN 917
                   |.|.||..:.|..|||||||:.::|.:|.||.|      |.|:|    |.:||.|:.|
 Frog   498 -------VQKSKLIGICGSVGSGKTSLILSILGQMTLLEG------TVTVSGRIAYAAQQAWIFN 549

  Fly   918 DTIRENILFGESFRPKRYDFVLEACALKPDIELMPRGDLSIIGERGINISGGQRQRIAIARAIYS 982
            :::||||||||.::.|:|..||:.|.|.||||.:|.|||:.|||||.|:||||||||::|||:||
 Frog   550 ESLRENILFGEEYKEKKYQRVLKTCCLYPDIESLPHGDLTEIGERGTNLSGGQRQRISLARALYS 614

  Fly   983 SANVVIMDDPLASLDNEVGEHIFQHCIREMLQKSNRTFILVTQQLHRIKEAEYLIAIKDGRVEAC 1047
            ..:||::||||:::|.:||..:|:..|:..:.  ||..:.||.||..:.|.:.::.:|:|.:...
 Frog   615 ERSVVLLDDPLSAVDVQVGAQLFKKAIKHGMM--NRIVLFVTHQLQYLVECDEVLMMKNGSIAEQ 677

  Fly  1048 GSYADIELMQPRITAEWNAIIAMAKAKNDNPSQNPGEKTAGERWKLLKNVSKLGLQRSISVTMDA 1112
            |::.  |||                            |..|:...|.:::               
 Frog   678 GTHE--ELM----------------------------KYQGDYAVLFQSM--------------- 697

  Fly  1113 NVACHADAIDGSGCISVANMQSNVVEEDDQVSVSYPIGNASCGGFNLQRKRSSIYGSRHLMYDVP 1177
                               .|.|.::.|.|           |.....::....:..|.|.     
 Frog   698 -------------------QQVNSIKSDVQ-----------CSPMKYEQLDRQVTSSHHA----- 727

  Fly  1178 LPIDECQGDDVIMRPRRRHTLGRRGSRNTNSSHRLSGLSTLTATSESSSISGDVLSRSVLATSCS 1242
                     .|:.:.:.:.||    |..||...        |....|..:|.|            
 Frog   728 ---------TVVQQSKEQGTL----SELTNQEE--------TGHFTSEDVSAD------------ 759

  Fly  1243 SYAESSVDGGDLATAAPEPRVQSWQPPQHVTHHQPLSRNASSPPAMEVANPDVKKSEEARRSNTS 1307
                                        |:||                      |||...|    
 Frog   760 ----------------------------HLTH----------------------KSEMVNR---- 770

  Fly  1308 SESPLDDHVRGSFQQFLRRMSMRRSNKPKNHHHPLSATNSILSISEESPPVVHFPASILATDGNK 1372
                                                                    ..:.|||  
 Frog   771 --------------------------------------------------------DFMVTDG-- 777

  Fly  1373 NETQSEEKPKKCVNIDSKETTINCDDNCYSASDKELRANVTSSPADQEQHNERHVLAE--VAGES 1435
                   :...|...|             ...|:|       ..||:::...  ||..  :...:
 Frog   778 -------QITGCKQAD-------------QYGDQE-------DDADEDEKGS--VLGNTIIVNNN 813

  Fly  1436 GRESMPLARLAIDTERKYGKISDDIYLMYIRAAG------LPIITIFFITALI----WQCLRVYT 1490
            .|::..|..   ..|:..|.:...||.:||:|||      |..:...|.|..:    |     :.
 Frog   814 ERQNRDLME---PEEKGCGSVPCPIYWVYIKAAGGALFCVLNAVLFIFTTGSMAFSNW-----WL 870

  Fly  1491 DIWLQQWSNVHGRVASKGHVVLHPSEQDHEVTYYFRMYAAISCVCIIMA---------LVSTPAG 1546
            ..|::|.|.....|.|  :|.|............|.:|..||.:..::.         :.||   
 Frog   871 SYWIKQGSGNTSVVTS--NVTLSSDNMSDNPDLEFYIYVYISTLAAVLGFRFIRGYVFVKST--- 930

  Fly  1547 QYAGCNARRNLHDKLLQTILHKTLHFFQVTPLGRIVNRFSNDMAVIDKKIAATGQRLLQ---FTL 1608
                ..|...|||:|.|.:||..|..|..||||||:|||:.||..:|.::....::|:|   ..|
 Frog   931 ----LKASTKLHDQLFQKVLHSPLKLFDTTPLGRILNRFTKDMDEVDARLPCQLEQLIQNMILVL 991

  Fly  1609 LCLSAILINVTITPWILVLTLPICGAYYLIQKFYRCSARELQRIENATNSPVISHLSETIQGVTT 1673
            .||..|..   :.||.||..||:...::||.|..|...|||:|::|.:.||.:||::.::.|:||
 Frog   992 FCLGMISF---VFPWFLVSVLPLSILFFLINKVSRVLIRELKRLDNISQSPFLSHVTASLHGITT 1053

  Fly  1674 IRAFNQQTRFTEILFKRLEANTIAYALLNTSHRWLGVSLDYLGGCIVFVATVTALTAASVSCRRH 1738
            |:|:|:.|.|.....|.|:.|.:...|.:.:.|||.|.||     ::.:..:|..:...|....|
 Frog  1054 IQAYNKNTDFILRFQKLLDINQVPCFLFSCASRWLAVRLD-----LISMIVITLTSVCIVLMHGH 1113

  Fly  1739 YEATTSPSASASPSPFETYAVTKSPSELRPSPSLVGLAINYTLLVPIYLNWVVKLLADMEMYAGS 1803
            .                             .|:..||||:|.:.:.....:.|:|:.:.|....|
 Frog  1114 I-----------------------------PPAYAGLAISYAVQLTGLFQYTVRLVTETEARFTS 1149

  Fly  1804 VERIAHYAQGQDADADADADADADVDADLDHEPSSNEDVSAEVDRSSQSDAGDKVYPGATTAAGD 1868
            ||||.||.:..:::                 ||                                
 Frog  1150 VERINHYIKNLESE-----------------EP-------------------------------- 1165

  Fly  1869 VDEDGDQQRIGGARGGGGDCGYRQGHENGAEANADKLNAGNVTGDGNHLNFHHPPATAGDKVEQA 1933
                                                                             
 Frog  1166 ----------------------------------------------------------------- 1165

  Fly  1934 TTKTSVIKDKQLPPQQDDKDKKVVLPNEPARKLERYQSVPISWPQRGDIHFDNVSLRYEGQKQNV 1998
                  :|.|::.|:                          :|||.|.|.|:||.:||..:...|
 Frog  1166 ------LKAKEITPK--------------------------TWPQEGAITFENVEMRYRDKLPLV 1198

  Fly  1999 ISNLTLKIPAGQRIGICGRTGSGKSSLGLSLFGVLQTTRGHIYIDDVDIQRIRPDELRTRLSIIP 2063
            :.|::..|...::|||.|||||||||||:.||.::....|.:.||:..|..|....||.:||::|
 Frog  1199 LKNISFSIRPKEKIGIVGRTGSGKSSLGMVLFRLVDLAGGSVTIDNFCINTIGLKNLRGKLSVLP 1263

  Fly  2064 QDVHLFNATIRENLDPHGYFQDLQLWNCLELAQLKEFVNGHLPLGLDTVICDGGLNLSAGHRQLL 2128
            ||..||..:||.||||.....|.::||.||...:|:.|: .|...|:..:.:.|.|.|.|.||||
 Frog  1264 QDPVLFVGSIRSNLDPLNLHTDEEVWNALERTHMKQHVS-KLVGKLNYEVSENGSNFSVGERQLL 1327

  Fly  2129 CLARAILRGSVCLVLDEATSVLDSSTESALLKAADLAFRGRTIITIAHRLTTILDYDRLIVLDQG 2193
            |:|||:||.|..|:|||||:.:|:.|::.:.:....||...|::.|||||.|||..||::|:|:|
 Frog  1328 CMARALLRSSKVLLLDEATAAIDNETDALIQETVKEAFHDCTVLIIAHRLNTILHCDRIMVMDKG 1392

  Fly  2194 RIVEDGNPRELQQLEGSVFRGLLEKGASKW 2223
            :|||...|..|...:.|.|..:    |::|
 Frog  1393 KIVEFEKPSVLLSNKKSRFHAM----ATQW 1418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
abcc12XP_002937916.3 MRP_assoc_pro 27..1415 CDD:188098 474/2040 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.