DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur and abcc2

DIOPT Version :10

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:XP_004915926.1 Gene:abcc2 / 100485020 XenbaseID:XB-GENE-1012796 Length:1552 Species:Xenopus tropicalis


Alignment Length:510 Identity:87/510 - (17%)
Similarity:160/510 - (31%) Gaps:171/510 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 VRSKD--TGISEESNGISSTMGIMKMMGLRNSTKHDDRYKNLKVSSLMLFPY--EEFLKFFQCEV 436
            :.|:|  ...|:||:   :|:....::|     :.|.:|......|.:|:.:  ....:|.|...
 Frog    38 IESQDWAYAASKESH---ATLVFHNLLG-----EIDQQYSRFLQESNVLYQHNLRRIKQFLQSRY 94

  Fly   437 FDLSPRGLVNCGNSCY----------ANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELE 491
            .: .|..:......|.          |.|..|......|..|.:..:...             ||
 Frog    95 LE-KPMEIARIVARCLWEESRLLQTAATAAQQGGQANHPTAAVVTEKQQM-------------LE 145

  Fly   492 QHVMMLRESGGPLSAS-RILSH-----------------MRSINCQIGDGSQEDAHEFLRLLVA- 537
            ||:..:|:....|... :::.:                 |:.:|......:::...:..::|.| 
 Frog   146 QHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVTRQKMQQLEQMLTAL 210

  Fly   538 -SMQSICLERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLR-----CDHESERYENIMDLTLE 596
             .|:...:..|.|.......:|:|...:.:...:.|.::.|:.     |   .:|.||       
 Frog   211 DQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPPNIC---LDRLEN------- 265

  Fly   597 IYGWVESLQDALTQFTRP-----EDLDGENMYR---------------------CSRCAGYVRAR 635
               |:.||.::..| ||.     |:|..:..|:                     ..:.|..|..:
 Frog   266 ---WITSLAESQLQ-TRQQIKKLEELQQKVSYKGDPIVQHRPMLEERIVELFRNLMKSAFVVERQ 326

  Fly   636 KELSIH-EAPNILTI---------VLKRFQEGRYG-KINKCISFPEMLDMIPFMTRTGDVPPLY- 688
            ..:.:| :.|.::..         :|.:|.|..|. ||..||.           ..:|||..|. 
 Frog   327 PCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNYQLKIKVCID-----------KDSGDVAALRG 380

  Fly   689 ----------------------MLYAVIVHLDTLNASFSG-----------------HYISYVKD 714
                                  .|.|...|| ||.....|                 |.|::..:
 Frog   381 SRKFNILGTNTKVMNMEESNNGSLSAEFKHL-TLREQRCGNGGRANCDASLIVTEELHLITFETE 444

  Fly   715 LRGNWYRIDDSEIHPVPMT------QVMSEGAYMLFYMRSYPRPQRGEHNGKAPV 763
            :.....:| |.|.|.:|:.      |:.:..|.:|:|......|:......|.|:
 Frog   445 VYHQGLKI-DLETHSLPVVVISNICQMPNAWASILWYNMLTNNPKNVNFFTKPPI 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 ABC_6TM_SUR1_D1_like 301..682 CDD:350035 62/381 (16%)
TM helix 1 301..324 CDD:350035
TM helix 2 385..433 CDD:350035 9/49 (18%)
TM helix 3 480..525 CDD:350035 8/62 (13%)
TM helix 4 526..575 CDD:350035 8/50 (16%)
TM helix 5 587..631 CDD:350035 12/69 (17%)
TM helix 6 648..681 CDD:350035 8/42 (19%)
ABCC_MRP_domain1 837..1043 CDD:213217
ABC_6TM_SUR1_D2_like 1475..1811 CDD:350046
TM helix 1 1475..1496 CDD:350046
TM helix 2 1520..1568 CDD:350046
TM helix 3 1575..1620 CDD:350046
TM helix 4 1621..1670 CDD:350046
TM helix 5 1682..1727 CDD:350046
TM helix 6 1777..1810 CDD:350046
ABCC_MRP_domain2 1980..2201 CDD:213211
abcc2XP_004915926.1 MRP_assoc_pro 10..1544 CDD:188098 87/510 (17%)
Blue background indicates that the domain is not in the aligned region.

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