DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur and abcb10

DIOPT Version :9

Sequence 1:NP_001334732.1 Gene:Sur / 34350 FlyBaseID:FBgn0028675 Length:2223 Species:Drosophila melanogaster
Sequence 2:XP_001343218.3 Gene:abcb10 / 100003744 ZFINID:ZDB-GENE-040525-2 Length:710 Species:Danio rerio


Alignment Length:835 Identity:180/835 - (21%)
Similarity:313/835 - (37%) Gaps:252/835 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1414 SSPADQEQHNERHVLAEVAGESGRESMPLARLAIDTERKYGKISDDIYLMYIRAAGLPIITI--- 1475
            |:..|..|.::..|..|.:.::..:|:|:..   :..:|..:::.........|.|..:|:.   
Zfish    88 STSTDSNQTSKSVVNQESSAKTTADSLPVPS---EDVKKLLQLAHPQRWRLTAAVGFLVISSTVT 149

  Fly  1476 ----FFITALIWQCLRVYTDIWLQQWSNVHGRVASKGHVVLHPSEQDHEVTYYFRMYAAISCVCI 1536
                ||:..:|   ..:||.                      |:|.         ..::::.:|:
Zfish   150 MSAPFFLGKVI---DTIYTS----------------------PTED---------FSSSLTSLCL 180

  Fly  1537 IMALVSTPAG----------QYAGCNARRNLHDKLLQTILHKTLHFFQVTPLGRIVNRFSNDMAV 1591
            ::..|....|          |.:|....|.|.:.|..:||.:.|.||..|..|.::||.|.|.|:
Zfish   181 MLTGVFLCGGAANAARVYLMQISGQQIVRKLRESLFSSILKQELGFFDKTRTGELINRLSADTAI 245

  Fly  1592 IDKKIA---ATGQRLLQFTLLCLSAIL-INVTITPWILVLTLPICGAYYLIQKFYRCSARELQ-R 1651
            :.:.:.   :.|.|.|......:..:| ::.::..::|::..||.....:..:|.|..:|..| .
Zfish   246 VGRCLTDNLSDGLRSLAQAGAGVGMMLYVSPSLAAFVLMVVPPIACLAVIFGRFLRSISRRTQDA 310

  Fly  1652 IENATNSPVISHLSETIQGVTTIRAFNQQTRFTEILFKRLEANTIAYALLNTSHRWLGVSLDYLG 1716
            :..||..     ..|.|..:.|:|||.::  .||:                   :.....:|:  
Zfish   311 LAEATQL-----AEERISNLRTVRAFGKE--LTEV-------------------QKYSQKVDH-- 347

  Fly  1717 GCIVFVATVTALTAASVSCRRHYEATTSPSASASPSPFETYAVTKSPSELRPSPSLVGLAINYTL 1781
              |..:|...|:.:|..                       |.||             ||:.|..:
Zfish   348 --IFELAKKEAVVSAGF-----------------------YGVT-------------GLSGNVII 374

  Fly  1782 LVPIYLNWVVKLLADMEMYAGSVERIAHYAQGQDADADADADADADVDADLDHEPSSNEDVSAEV 1846
            |..:|...:  |:|...|..|.:.....||                                   
Zfish   375 LSVLYKGGL--LMASEAMTVGQLSSFLMYA----------------------------------- 402

  Fly  1847 DRSSQSDAGDKVYPGATTAAGDVDEDGDQQRIGGARGGGGDCGYRQGHENGAEANADKLNAGNVT 1911
                       .:.|.:.|                               |..:...:|..|  .
Zfish   403 -----------FWVGISIA-------------------------------GFSSFYSELMKG--L 423

  Fly  1912 GDGNHLNFHHPPATAGDKVEQATTKTSVIKDKQLPPQQDDKDKKVVLPNEPARKLERYQSVPISW 1976
            |.|..|                   ..:|..|...|..:.    :||.:|..             
Zfish   424 GAGTRL-------------------WELIDRKPEFPLNEG----LVLTSELL------------- 452

  Fly  1977 PQRGDIHFDNVSLRYEGQKQN-VISNLTLKIPAGQRIGICGRTGSGKSSLGLSLFGVLQTTRGHI 2040
              :|::.|.|||..|..:|.: :..:|:|.:|||..:.:.|.:|||||||...|..:.....|.:
Zfish   453 --KGELEFRNVSFAYPTRKDSPIFQDLSLHVPAGSVLAVVGSSGSGKSSLVSLLLRLYDPDSGIV 515

  Fly  2041 YIDDVDIQRIRPDELRTRLSIIPQDVHLFNATIRENL-----DPHGYFQDLQLWNCLELAQLKEF 2100
            .:|..||:.:.|..||:.:..:.|:..||:.:|.||:     ||.....: .::...::|...:|
Zfish   516 SVDGHDIRDLNPYWLRSHIGTVSQEPVLFSCSIAENIAYGAPDPSQVTVE-DIYRAAQIANAHDF 579

  Fly  2101 VNGHLPLGLDTVICDGGLNLSAGHRQLLCLARAILRGSVCLVLDEATSVLDSSTESALLKAADLA 2165
            :. ..|.|.|||:.:.|:.||.|.:|.:.:|||:|:....|:||||||.||:..|..:.:|.:..
Zfish   580 IQ-EFPKGYDTVVGEKGVLLSGGQKQRVAIARALLKNPKILLLDEATSALDAENEFLVQEALERL 643

  Fly  2166 FRGRTIITIAHRLTTILDYDRLIVLDQGRIVEDGNPRELQQLEGSVFRGLLEKGA 2220
            ..|||::.|||||:||...|.:.||||.|::|.|:..:|...:..:||.|:||.|
Zfish   644 MDGRTVLIIAHRLSTIQSADSVAVLDQHRVMEIGSHSQLLANDQGLFRKLMEKQA 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SurNP_001334732.1 None
abcb10XP_001343218.3 MsbA_rel 123..697 CDD:131259 171/794 (22%)
ABC_membrane 141..402 CDD:279056 66/362 (18%)
P-loop_NTPase 457..697 CDD:304359 85/241 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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