DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4839 and AT3G06270

DIOPT Version :9

Sequence 1:	NP_609349.1	Gene:	CG4839 / 34348	FlyBaseID:	FBgn0032187	Length:	1003	Species:	Drosophila melanogaster
Sequence 2:	NP_187278.2	Gene:	AT3G06270 / 819801	AraportID:	AT3G06270	Length:	348	Species:	Arabidopsis thaliana

Alignment Length:	261	Identity:	53/261 - (20%)
Similarity:	90/261 - (34%)	Gaps:	71/261 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   116 SGGSAINVIRSSSKLKPVKERRPTALPTEVPSIEIEDV----------RDAKDTGDGMDS--LGE 168
            |.|.:...:.::..||. |:::|.. ...|||...:.|          .|:.|. :..|:  :..
plant    17 SDGDSRGPLEANGVLKG-KDQKPLG-SIHVPSPNFDMVYSVLSQRGYYPDSPDK-ENQDTYCIKT 78

  Fly   169 RVQPGANAH-VDVVDGGGKSKLKVNVNGIIDESVAHDDDYDTPSSNSIATTP-VTEGPVK----F 227
            .:|...|.| ..|.||.|  .|....:..:.|.|.          ..::..| :.|.|.|    .
plant    79 ELQGNPNVHFFGVFDGHG--VLGTQCSNFVKERVV----------EMLSEDPTLLEDPEKAYKSA 131

  Fly   228 FIGHTQELSAQQTDDTLSCQSSDANNNSAAKLTNGVVPQEQPEREMGKQQALQAPPRAKSSSNVS 292
            |:...:||...:.||::|         ....:|..||..:.....:|..:|:.|   .|..:.:.
plant   132 FLRVNEELHDSEIDDSMS---------GTTAITVLVVGDKIYVANVGDSRAVLA---VKDRNRIL 184

  Fly   293 LNYLAKSQTDSQRRR---------RVSTMPDINIPPAPPL------------PPELLV-----PG 331
            ...|:..||..::..         ||.::..:.....|.:            ||.|.|     ||
plant   185 AEDLSYDQTPFRKDECERVKACGARVLSVDQVEGLKDPNIQTWANEESEGGDPPRLWVQNGMYPG 249

  Fly   332 T 332
            |
plant   250 T 250

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4839	NP_609349.1	Crp	428..577	CDD:223736
		CAP_ED	431..539	CDD:237999
		Crp	544..>650	CDD:223736
		CAP_ED	550..663	CDD:237999
		S_TKc	695..951	CDD:214567
		STKc_cGK	700..957	CDD:270724
AT3G06270	NP_187278.2	PP2Cc	68..342	CDD:238083	41/208 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000531
OrthoInspector	1	1.000	-	-		mtm1102
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000