DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4839 and pnpla6

DIOPT Version :10

Sequence 1:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster
Sequence 2:XP_005160109.1 Gene:pnpla6 / 560986 ZFINID:ZDB-GENE-050107-4 Length:1343 Species:Danio rerio


Alignment Length:748 Identity:143/748 - (19%)
Similarity:254/748 - (33%) Gaps:210/748 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 PSIEIEDVRDAK----DTG-DGMDSLGERVQPGANAHVDVVDGGGKSKLKVNVNGIIDESVAHDD 205
            |...|..|:|.|    .|| ||.|.:.:.|.||.:.|              ::..|:|....|..
Zfish   203 PDSSIYVVQDGKLELCLTGQDGKDGVVKEVYPGDSVH--------------SLLSILDVITGHQR 253

  Fly   206 DYDTPSSNSIATTPVTEGPVKFF---------------------------------IGHTQELSA 237
            .|.|.|:.:...:.|...||..|                                 :|.|.||.:
Zfish   254 PYKTVSARAAEVSTVLRLPVDAFLSIFEKYPESLVRVVQIIMVRLQRVTVLALHNYLGLTNELFS 318

  Fly   238 QQTDDTLSCQSSDANNNSAAKLTNGVVPQEQPEREMGKQQALQAPPRAKSSSNVSLNYLAKSQTD 302
            .:.....|..|.....:|             |.|...:..:|..|.:.:.::       .::.|.
Zfish   319 HEMQPRSSPLSPHPTRSS-------------PVRHSKRFGSLTVPDKHREAA-------VQNATG 363

  Fly   303 SQRRRRVSTMPDINIPPAPPLPPELLVPGTPLHLRKKRSM--ERQQQQKQQE--------QQQQQ 357
            ....:...|:|.::...:.|:.    :.|....||....|  ||.:.....|        :|:::
Zfish   364 GDHGKEGGTIPTLSRTISMPVD----IAGMQKSLRSDFDMAYERGRISVSAEDGVPAFTKEQRER 424

  Fly   358 EIQQDATNSQDQMAGAEESHKSSDSSTPKTHRVEGGLIYVRPNFPIQSDIEIESIAKDEGTRNLI 422
            ::..|...|...:...|||.....||      .:|     |||          :...:|..:.::
Zfish   425 KVTVDEVPSGVYLYPEEESGMDIFSS------FQG-----RPN----------ATVFEEAQKEIL 468

  Fly   423 RTAIERNDFLNNLMDKERKEMVINAMAPASYRKHSLIIREHEEGSEIYVSAEGQYDV----IRGG 483
            |           ||..|...::...:.....:..|::.|:.::...::....|...|    |...
Zfish   469 R-----------LMKIEDPSLLNGRVTFHHAKAGSVLARQGDQDVSLHFVLSGCLHVYQKMIDKQ 522

  Fly   484 QLVASF--GPATVFGELAILYNAPRQASIEAATDARVWKIARETFRAIMQISGSREREE------ 540
            :.|..|  .|..:.|:||:|...|...:|:|..|....||::..|..||     ||:..      
Zfish   523 EAVCLFVTQPGEMVGQLAVLTGEPLIFTIKAERDCTFLKISKSEFYEIM-----REQPSVVLSAA 582

  Fly   541 NLQFLRSAPFLQEFDQSLLLKVVDLLQRKFYETDSCIVREGELGNEFYIIRCGTV--TIKKLDEQ 603
            :...:|.:.|:::.|.::....|        |....:.|:.:..:..||:..|.:  .|:|.:  
Zfish   583 HTVAIRMSAFVRQMDFAIDWMAV--------EAGRALYRQDDQSDCTYIVLNGRLRSVIRKAN-- 637

  Fly   604 QQEQIVANRKRGDYFGEQALLNADVRQASVYADAPGTEVLMLDREAFISYLGTIKQ--------- 659
            .::::|....|||..|....|....|..:|:| ...||::.|..    ..|..||:         
Zfish   638 GKKELVGEYGRGDLIGVVEALTRQPRATTVHA-VRDTELVKLPE----GTLNNIKRRYPQVVTRL 697

  Fly   660 ---LREKPSSQRNDTSGRSSTKSLEFDNEYSQVAI----SELKKIATLG-CGAFGRVDLVAYNQQ 716
               |.:|.........|..|:.:|...:..|...:    |.|..:|.|. |   ..|.:.|:|.:
Zfish   698 IHLLGQKILGNLQQPRGPFSSSALGLPSMASSPDVTNPASNLSTVAVLPVC---DEVPINAFNLE 759

  Fly   717 ------ALALKIIKKIEVVKQ-------DQIEHVYNEKNVMIKCRQSPFIVQLYRTYRNDKYVYF 768
                  |:...::...:::::       |.| |.|         |.|.::.|     :.|.....
Zfish   760 LSHALSAIGPTLLLTSDIIRERLGASALDSI-HEY---------RLSGWLAQ-----QEDINRIV 809

  Fly   769 LMEACMGGDVWTVMSKRQYFDEKTAKFIAGCVV 801
            |.:...|...||....||          |.|::
Zfish   810 LYQTDSGMTPWTQRCIRQ----------ADCIL 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4839NP_609349.1 CAP_ED 431..539 CDD:237999 26/113 (23%)
CAP_ED 550..663 CDD:237999 26/126 (21%)
STKc_cGK 700..957 CDD:270724 22/116 (19%)
pnpla6XP_005160109.1 TM_EGFR-like 31..64 CDD:213052
CAP_ED 170..291 CDD:237999 24/101 (24%)
CAP_ED 467..577 CDD:237999 27/125 (22%)
CAP_ED 590..698 CDD:237999 25/122 (20%)
Pat_PNPLA6_PNPLA7 921..1226 CDD:132864
Blue background indicates that the domain is not in the aligned region.

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