DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4839 and prkar1aa

DIOPT Version :9

Sequence 1:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_001009989.1 Gene:prkar1aa / 494533 ZFINID:ZDB-GENE-050116-2 Length:379 Species:Danio rerio


Alignment Length:337 Identity:97/337 - (28%)
Similarity:158/337 - (46%) Gaps:21/337 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 LHLRKKRSMERQQQQKQQEQQQQQEIQQDATNSQDQMAGAEESHKSSDSSTPKTHRVEGGLIYVR 398
            |.|.:.:.|..||:...:...::.|:       ...|....:..:...:.:.:.:..|....|||
Zfish    56 LELEEAKQMVSQQKSSSRSDSREDEV-------SPPMNPVVKGRRRRGAISAEVYTEEDATSYVR 113

  Fly   399 PNFPIQSDIEIESIAKDEGTRNLIRTAIERNDFLNNLMDKERKEMVINAMAPASYRKHSLIIREH 463
            ...|           ||..|...:..|||:|....:|.|.||.: :.:||...:|.....:|::.
Zfish   114 KVIP-----------KDYKTMAALAKAIEKNVLFAHLDDNERSD-IFDAMFSVTYIAGETVIQQG 166

  Fly   464 EEGSEIYVSAEGQYDVIRGGQLVASFGPATVFGELAILYNAPRQASIEAATDARVWKIARETFRA 528
            :||...||..:|:.||....:.|.|.|....|||||::|..||.|::.|.|:.::|.|.|:::|.
Zfish   167 DEGDNFYVIDQGEMDVYVNNEWVTSIGEGGSFGELALIYGTPRAATVRAKTNVKLWGIDRDSYRR 231

  Fly   529 IMQISGSREREENLQFLRSAPFLQEFDQSLLLKVVDLLQRKFYETDSCIVREGELGNEFYIIRCG 593
            |:..|..|:|:...:||.....|:..|:...|.|.|.|:...:|....||.:|:.|:||:||..|
Zfish   232 ILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALETVQFEDGQKIVVQGQPGDEFFIILEG 296

  Fly   594 TVTIKKLDEQQQEQIVANR-KRGDYFGEQALLNADVRQASVYADAPGTEVLMLDREAFISYLGTI 657
            :..:.:...:.:|.:...| ...|||||.|||....|.|:|.|..| .:.:.|||..|...||..
Zfish   297 SAAVLQRRSENEEFVEVGRLAPSDYFGEIALLMNRPRAATVVARGP-LKCVKLDRPRFERVLGPC 360

  Fly   658 KQLREKPSSQRN 669
            ..:.::...|.|
Zfish   361 SDILKRNIQQYN 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4839NP_609349.1 Crp 428..577 CDD:223736 47/148 (32%)
CAP_ED 431..539 CDD:237999 36/107 (34%)
Crp 544..>650 CDD:223736 36/106 (34%)
CAP_ED 550..663 CDD:237999 37/113 (33%)
S_TKc 695..951 CDD:214567
STKc_cGK 700..957 CDD:270724
prkar1aaNP_001009989.1 DD_RIalpha_PKA 14..62 CDD:213048 2/5 (40%)
Crp 129..>255 CDD:223736 43/126 (34%)
CAP_ED 135..244 CDD:237999 37/109 (34%)
Crp 247..>357 CDD:223736 37/110 (34%)
CAP_ED 253..368 CDD:237999 37/115 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000531
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.