DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4839 and for

DIOPT Version :9

Sequence 1:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster


Alignment Length:1083 Identity:352/1083 - (32%)
Similarity:540/1083 - (49%) Gaps:155/1083 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KFTPA-------EDENTDTILNTQDSNVQIGKYIR--REEKPLYSPIVTPSASEAKLQRLRQQQQ 70
            |..||       .|.:|||...::.....|.::|.  .|::.:::.|.:|:         ..|.|
  Fly    67 KLQPAIIDRDWERDRDTDTDTRSEAKPPDIVEHIEPVEEQRQIHTQIQSPA---------EIQIQ 122

  Fly    71 PPGSPPAPA-------RWTLHSVAENGSANNGVQERKFRTNKDKLQAQDACPSGGSAINVIRSSS 128
            .|.:||||:       |:..||.||         :|...|.::.....:|          :|.::
  Fly   123 IPPTPPAPSIQIQIQQRYRRHSSAE---------DRNLNTRRNDSNITEA----------LRKAA 168

  Fly   129 KLKPVKERRPTA---LPTEVPSIEIEDVRDAKDTGDGMDSLGERVQPGANAHVDVVDG------- 183
            .:    ::.|.|   .||::..:.|.:..:..:|.....:.|.  ...:|.:.::|.|       
  Fly   169 SM----QQEPNANYQFPTDLGLVSIVNNNNNTNTHPSGSNSGS--NNNSNINNNLVGGIVTLPAA 227

  Fly   184 GGKSKLKVNVNG--IIDESVAHDD------DYDTPSSNSIATTPVTEGPVKFFIGHTQELSAQQT 240
            ||...|:...:|  :|.....|.|      .|.||.|.:   ..:.:.|....  |.|||..||.
  Fly   228 GGLIGLEHTASGLRLIPAPPTHSDVLTHTLIYGTPPSGA---QQLNQDPRSLL--HQQELQLQQR 287

  Fly   241 DDTLSCQSSDANNNSAAKLTNGVVPQEQPEREMGKQQAL-----QAPPRAKSSSNVSLNYLAKSQ 300
            ...|  |...|............|...||.....:..|:     .:|.:.:..:.::|      |
  Fly   288 YQQL--QQLQAQTQGLYTSQGSPVLYHQPSPGSSQPVAIPGATCHSPTQLQPPNTLNL------Q 344

  Fly   301 TDSQRRRRVSTMPDINIPPAPPLPPELLVP---------GTPLHLR----------KKRSMERQQ 346
            ...|..|.....|......|.|.|..|:.|         .:|...|          |.:.|:|..
  Fly   345 QQMQSLRISGCTPSGTGGSATPSPVGLVDPNFIVSNYVAASPQEERFIQIIQAKELKIQEMQRAL 409

  Fly   347 QQKQQE----QQQQQEIQQDATNSQDQMAGAEESHKSSDS-------STPKTHRVEGGLIYVRPN 400
            |.|..|    :....:.|.....|:...||...:..:|.|       |.|.|  ..|.......|
  Fly   410 QFKDNEIAELKSHLDKFQSVFPFSRGSAAGCAGTGGASGSGAGGSGGSGPGT--ATGATRKSGQN 472

  Fly   401 FPIQ------------SDIEIESIA-----KDEGTRNLIRTAIERNDFLNNLMDKERKEMVINAM 448
            |..|            |.:.:|.::     |||.:|.||:.||..|||:.|| |..:...:::.|
  Fly   473 FQRQRALGISAEPQSESSLLLEHVSFPKYDKDERSRELIKAAILDNDFMKNL-DLTQIREIVDCM 536

  Fly   449 APASYRKHSLIIREHEEGSEIYVSAEGQYDVIRGGQLVASFGPATVFGELAILYNAPRQASIEAA 513
            .|..|...:|||:|.:.||.:||..:|:.:|.|.|:.:::...|.|.||||||||..|.|:|.|.
  Fly   537 YPVKYPAKNLIIKEGDVGSIVYVMEDGRVEVSREGKYLSTLSGAKVLGELAILYNCQRTATITAI 601

  Fly   514 TDARVWKIARETFRAIMQISGSREREENLQFLRSAPFLQEFDQSLLLKVVDLLQRKFYETDSCIV 578
            |:..:|.|.|:.|:.||..:|...:.|...||:|.|..::..:..|:|:.|:|:...|:....||
  Fly   602 TECNLWAIERQCFQTIMMRTGLIRQAEYSDFLKSVPIFKDLAEDTLIKISDVLEETHYQRGDYIV 666

  Fly   579 REGELGNEFYIIRCG--TVTIKKLDEQQQEQIVANRKRGDYFGEQALLNADVRQASVYAD-APGT 640
            |:|..|:.|:||..|  .||||:.| .|:|:.:....:||:|||:||...|:|.|::..: |.|.
  Fly   667 RQGARGDTFFIISKGKVRVTIKQQD-TQEEKFIRMLGKGDFFGEKALQGDDLRTANIICESADGV 730

  Fly   641 EVLMLDREAFISYLGTIKQLREKPSSQRNDTSGRSSTKSLEFDNEYSQVAISELKKIATLGCGAF 705
            ..|::|||.|...:..:.:::     .|.|..|....:.:  :.|:..:.:::|:.|||||.|.|
  Fly   731 SCLVIDRETFNQLISNLDEIK-----HRYDDEGAMERRKI--NEEFRDINLTDLRVIATLGVGGF 788

  Fly   706 GRVDLVAYN---QQALALKIIKKIEVVKQDQIEHVYNEKNVM--IKCRQSPFIVQLYRTYRNDKY 765
            |||:||..|   .::.|||.:||.::|:..|.:|:.:||.:|  ..|:   |||:|::|:::.||
  Fly   789 GRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEIMGEANCQ---FIVKLFKTFKDKKY 850

  Fly   766 VYFLMEACMGGDVWTVMSKRQYFDEKTAKFIAGCVVEAFDYLHSHHFIYRDLKPENLMLGTDGYC 830
            :|.|||:|:||::||::..:..||:.|.:|...|||||||||||.:.||||||||||:|...||.
  Fly   851 LYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLNERGYV 915

  Fly   831 KLVDFGFAKFVRQNEKTNTFAGTPEYVAPEIILDRGHDRAVDYWALGILVYELLVGKTPFRGVNQ 895
            |||||||||.::...||.||.|||||||||:||:||||.:.|||:||:|::|||.|..||.|.:.
  Fly   916 KLVDFGFAKKLQTGRKTWTFCGTPEYVAPEVILNRGHDISADYWSLGVLMFELLTGTPPFTGSDP 980

  Fly   896 IKIYQQILSGIDVIHMPSRIPKSAQHLVRHLCKQLPAERLGYQRKGIADIKRHSWFESLDWQRLK 960
            ::.|..||.|||.|..|..|.::|.:|::.||:..|||||||||.||::|::|.||:...|..|:
  Fly   981 MRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQRGGISEIQKHKWFDGFYWWGLQ 1045

  Fly   961 LKQLPSPIKRPLKSWTDLQYFGPSGVENDYEPPEELSGWDKDF 1003
            ...|..|||..:||..|...|.....:.:..||::::||||||
  Fly  1046 NCTLEPPIKPAVKSVVDTTNFDDYPPDPEGPPPDDVTGWDKDF 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4839NP_609349.1 Crp 428..577 CDD:223736 53/148 (36%)
CAP_ED 431..539 CDD:237999 41/107 (38%)
Crp 544..>650 CDD:223736 41/108 (38%)
CAP_ED 550..663 CDD:237999 38/115 (33%)
S_TKc 695..951 CDD:214567 136/260 (52%)
STKc_cGK 700..957 CDD:270724 135/261 (52%)
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374 9/46 (20%)
Crp 518..>627 CDD:223736 43/109 (39%)
CAP_ED 520..629 CDD:237999 41/109 (38%)
Crp 632..>753 CDD:223736 42/126 (33%)
CAP_ED 638..754 CDD:237999 38/121 (31%)
S_TKc 778..1036 CDD:214567 136/260 (52%)
STKc_cGK 783..1043 CDD:270724 136/262 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 247 1.000 Inparanoid score I1043
Isobase 1 0.950 - 0 Normalized mean entropy S1041
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123183at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1102
orthoMCL 1 0.900 - - OOG6_100630
Panther 1 1.100 - - P PTHR24353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X815
98.820

Return to query results.
Submit another query.