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Protein Alignment CG4839 and orb6

DIOPT Version :10

Sequence 1:	NP_609349.1	Gene:	CG4839 / 34348	FlyBaseID:	FBgn0032187	Length:	1003	Species:	Drosophila melanogaster
Sequence 2:	NP_593165.1	Gene:	orb6 / 2543441	PomBaseID:	SPAC821.12	Length:	469	Species:	Schizosaccharomyces pombe

Alignment Length:	388	Identity:	115/388 - (29%)
Similarity:	195/388 - (50%)	Gaps:	70/388 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   662 EKPSSQRND----TSGRSSTKSLEFDNEYSQVAISELKKIATLGCGAFGRVDLVAYNQQAL---- 718
            |:.|.:|.:    .||...::.|.|  ..:::::.:...|..:|.||||.|.||    |.|
pombe    59 ERGSEERKNRQLRASGEKESQFLRF--RRTRLSLEDFSTIKVIGKGAFGEVRLV----QKLDTGK 117

  Fly   719 --ALKIIKKIEVVKQDQIEHVYNEKNVMIKCRQSPFIVQLYRTYRNDKYVYFLMEACMGGDVWTV 781
              |:|.:.|.|:.|:||:.||..|:::::: ..||::|.||..:::..|:|.:||...|||:.|:
pombe   118 IYAMKSLLKTEMFKRDQLAHVKAERDLLVE-SDSPWVVSLYYAFQDSLYLYLIMEFLPGGDLMTM 181

  Fly   782 MSKRQYFDEKTAKF-IAGCVVEAFDYLHSHHFIYRDLKPENLMLGTDGYCKLVDFGFAK-FVRQN 844
            :.....|.|...:| :|.||:...| :|...:|:||:||:|:::..||:.||.|||.:. |.:|:
pombe   182 LINYDTFSEDVTRFYMAECVLAIAD-VHRMGYIHRDIKPDNILIDRDGHIKLSDFGLSTGFYKQD 245

  Fly   845 EKT--------NTF---------------------------------AGTPEYVAPEIILDRGHD 868
            :..        ||.                                 .|||:|:||||.|.:|:.
pombe   246 QSASYMKPRTGNTVKRGQMVDAIWLTMSSKDKMATWKKNRRVMAYSTVGTPDYIAPEIFLQQGYG 310

  Fly   869 RAVDYWALGILVYELLVGKTPFRGVNQIKIYQQILSGIDVIHMPSRIPKSAQHLVRHLCKQLPAE 933
            :..|:|:||.:::|.|:|..||...|..:.|::|::..:.:..|:.|..|.:  .|.|..:|..:
pombe   311 QDCDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLTFPNDIHLSIE--ARDLMDRLMTD 373

  Fly   934 ---RLGYQRKGIADIKRHSWFESLDWQRLKLKQLPSPIKRPLKSWTDLQYFGPSGVENDYEPP 993
               |||  |.|..:|.:|.:|..:||..  :::..:|....|||.||..||....:|...|.|
pombe   374 SEHRLG--RGGAIEIMQHPFFTGIDWDH--IRETAAPFIPNLKSITDTHYFPVDELEQVPEQP 432

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.