DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4839 and rskn-2

DIOPT Version :10

Sequence 1:NP_609349.1 Gene:CG4839 / 34348 FlyBaseID:FBgn0032187 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_001348666.1 Gene:rskn-2 / 172581 WormBaseID:WBGene00008311 Length:773 Species:Caenorhabditis elegans


Alignment Length:331 Identity:106/331 - (32%)
Similarity:177/331 - (53%) Gaps:37/331 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   685 EYSQVAISELKKIATLGCGAFGRVDLVAY-----NQQALALKIIKKIEVV-KQDQIEHVYNEKNV 743
            |..:|::.....:..||.||:|:|.||..     :....|:|:::|..|: ||..:||...|:.|
 Worm     8 EGEKVSMENFALLRVLGKGAYGKVFLVRKVGGKDHNTIYAMKVLRKTRVLTKQKTLEHTMAERQV 72

  Fly   744 MIKCRQSPFIVQLYRTYRNDKYVYFLMEACMGGDVWTVMSKRQYFDEKTAKFIAGCVVEAFDYLH 808
            :.:.|.:||:|.|:..::.|..::.:||...||:::|.:..|.:||.:.|:|:...:|.|.|.||
 Worm    73 LERLRGTPFLVNLFYAFQTDTKLHIVMEYVRGGELFTHLCSRGHFDLEAARFVIAELVVAIDSLH 137

  Fly   809 SHHFIYRDLKPENLMLGTDGYCKLVDFGFAKFVRQNE--KTNTFAGTPEYVAPEII--LDRGHDR 869
            ....||||||.||::|..:|:.||.|||.:|.....|  :.|::.||.||::||:|  .:.|:..
 Worm   138 QRKVIYRDLKLENILLDEEGHVKLTDFGLSKLFLPGELDRANSYCGTIEYMSPEVINRPEGGYSD 202

  Fly   870 AVDYWALGILVYELLVGKTPFR---GVNQIK-IYQQILSGIDVIHMPSRIPKSAQHLVRHLCKQL 930
            .||:|:||::.:|||.|.:||.   ..|..| |.::|::  ..:..|..:...|:..:..|.::.
 Worm   203 VVDWWSLGVISFELLTGCSPFTVDGAQNSSKDIAKRIMT--KKVPFPKTMDVDARDFIGQLLEKK 265

  Fly   931 PAERLGYQRKGIADIKRHSWFESLDWQRLKLKQLPSPIKRPLKSW--------TDLQYFGPSGVE 987
            ..:||||  .|:.:||.|.:..|:||.        :.:||.||..        .|.|:|   ..|
 Worm   266 LEKRLGY--NGVDEIKNHKFMSSIDWD--------AAVKRTLKPVIVPRIGHDLDTQFF---SAE 317

  Fly   988 NDYEPP 993
            ...:||
 Worm   318 FTSQPP 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4839NP_609349.1 CAP_ED 431..539 CDD:237999
CAP_ED 550..663 CDD:237999
STKc_cGK 700..957 CDD:270724 93/270 (34%)
rskn-2NP_001348666.1 Protein Kinases, catalytic domain 22..287 CDD:473864 91/268 (34%)
S_TK_X 285..344 CDD:214529 13/50 (26%)
STKc_MSK_C 374..694 CDD:270994
Blue background indicates that the domain is not in the aligned region.

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