DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNT2 and SLO2

DIOPT Version :10

Sequence 1:XP_006711357.1 Gene:KCNT2 / 343450 HGNCID:18866 Length:1142 Species:Homo sapiens
Sequence 2:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster


Alignment Length:1544 Identity:643/1544 - (41%)
Similarity:845/1544 - (54%) Gaps:457/1544 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    30 DDRVQVEFYMNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLSCLLYIIRVLLE-NPS------ 87
            |:||:||:|:|||||||||:|:||||||||||||:.:..||||||:||||||:|: ||:      
  Fly    92 DERVRVEYYVNENTFKERLQLYFIKNQRSSLRIRIADLFLKLLSCVLYIIRVILDKNPTFITCYG 156

Human    88 --QGNE---------------------WSHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKG 129
              .||:                     |..|.||||...||.||:.:|::||.::::|.||.|||
  Fly   157 CEVGNKTEFIISAKLTEEEFQENPIINWDAILWVNRPTVLWVLQLLLAMVSLTQSLVLTYLGYKG 221

Human   130 NIWEQILRIPFILEIINAVPFIISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRAIQRTQSA 194
            |||:|||...||||::..:||.::|..|.|||||:|:||||||||.:||||.||||||:|::|||
  Fly   222 NIWQQILSFHFILELVTTIPFALTIVHPPLRNLFIPIFLNCWLAKRSLENMFNDLHRAMQKSQSA 286

Human   195 MFNQVLILISTLLCLIFTCICGIQHLERIG-KKLNLFDSLYFCIVTFSTVGFGDVTPETWSSKLF 258
            :..|:.||.:|||||:||.:|||||.:|.| :.||||.|.|:.:|||||||:||..|:.|.|:|:
  Fly   287 LSQQLTILSATLLCLVFTSVCGIQHFQRAGHRHLNLFQSTYYVVVTFSTVGYGDFVPDIWPSQLY 351

Human   259 VVAMICVALVVLPIQFEQLAYLWMERQKSGGNYSRHRAQTEKHVVLCVSSLKIDLLMDFLNEFYA 323
            :|.||||||:|||.||||||:.||||||.||:||.||||:|||||:|.::|..|.:|||||||||
  Fly   352 MVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYA 416

Human   324 HPRLQDYYVVILCPTEMDVQVRRVLQIPMWSQRVIYLQGSALKDQDLLRAKMDDAEACFILSSRC 388
            ||.|||:|||:|.|.|:|..:|.:||:|:|:|||||:|||.|||.||.||:|::|||||||::|.
  Fly   417 HPLLQDFYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFILAARN 481

Human   389 EVDRTSSDHQTILRAWAVKDFAPNCPLYVQILKPENKFHIKFADHVVCEEEFKYAMLALNCICPA 453
            ..|:|::|..||||:|||||||||.|.||||.:||:|.|:|||:|||||:|||||:||.||.||.
  Fly   482 YADKTAADEHTILRSWAVKDFAPNVPQYVQIFRPEHKLHVKFAEHVVCEDEFKYALLANNCTCPG 546

Human   454 TSTLITLLVHTSRGQEGQQSPEQWQKMYGRCSGNEVYHIVLEESTFFAEYEGKSFTYASFHAHKK 518
            .|||:|||:|||||||||||||:|.::||:|||||:|||||.:|.||.|||||||||||||:|:|
  Fly   547 ASTLVTLLLHTSRGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFHSHRK 611

Human   519 FGVCLIGVRRED-----NKNILLNPGPRYIMNSTDICFYINITKEENSAF---KNQD-------- 567
            :||.|:|||..:     .:.||||||||:||...|.|:|::|||||||||   :||.        
  Fly   612 YGVALVGVRPAELPEFYEETILLNPGPRHIMKKDDTCYYMSITKEENSAFVVNQNQTSDPTAAAK 676

Human   568 ----------------------------------QQRKSNVSRSFY------------------- 579
                                              |...:.:|.:|.                   
  Fly   677 EGSGTGGGGGASSSASHHHTAATANPTTTITTTVQATTTTISTTFTSSTLLSASTTTATINATST 741

Human   580 ---------------------------------------------HGPSRLPVHSIIASM----- 594
                                                         |.|.:.|.....||:     
  Fly   742 AAAAPPPVPSVCVRVPHSPSYDSGGGTTGTTHLQPYPYPQSYPQPHPPMQTPDSGEFASLFVPSE 806

Human   595 -GTVAI------DLQDTSC--RSASGPTLSLP----TEGSKEI---------------------- 624
             .|..|      :|:||:.  .:|:..|.:||    |.||..:                      
  Fly   807 NPTAVIISDSRQNLKDTTVTQTAATITTTTLPPPPQTMGSPSMAGGSGGCGGGGLGLGSAHSMGT 871

Human   625 --------------------------------------RRPSIAPVLEVADTSSI---------- 641
                                                  |||||.||.::..:||.          
  Fly   872 SLSITPATLTTTGNHLDVPFANNPNLLSPDVLNQRRGSRRPSILPVPDMFTSSSFSIAGNDDGEE 936

Human   642 -------------------------------QTCDLLSDQSEDE--------------------- 654
                                           :|..|:...|||.                     
  Fly   937 GDESDDEIDDEMPWRSPSEKIACLGGHFPQSRTYSLIMSSSEDSYQRGCSFCSATASASAAAVAV 1001

Human   655 -----------------------------TTPDEE------------------------------ 660
                                         ..|.||                              
  Fly  1002 AVAAAPAPAPAPAYPSDSAGESGTNADSAAMPSEEYLPQLRRRVMKKSYSCDSECRSVPGMGMGM 1066

Human   661 --------------------------------------------------------MSSNLE--- 666
                                                                    .||::|   
  Fly  1067 AMGVGLGGGTLARLAARRRQLQRCSSCSCSTATTTTTPAVAATTAMAAGSGATAFTSSSSVETRR 1131

Human   667 ------------YAKGYPPYSPYIGSSPTFCHLLHEKVPFCCLRLDKSCQHNYYEDAKAYGFKNK 719
                        ..||:||.||:||.|||.|:||.||.|.|||:|.:.|:|..|.:||.|.::||
  Fly  1132 PVRPVWVYDYSCIVKGFPPVSPFIGVSPTLCYLLKEKKPLCCLQLAQVCEHCSYRNAKEYQWQNK 1196

Human   720 LIIVAAETAGNGLYNFIVPLRAYYRPKKELNPIVLLLDNPPDMHFLDAICWFPMVYYMVGSIDNL 784
            .||:||:.|.||:||||:||||::|.|..||||:|||:..||:.||||:.:||:||:|:||||.|
  Fly  1197 TIILAADYASNGIYNFIIPLRAHFRSKTSLNPIILLLERRPDVAFLDALSYFPLVYWMLGSIDCL 1261

Human   785 DDLLRCGVTFAANMVVVDKESTMSAEEDYMADAKTIVNVQTLFRLFSSLSIITELTHPANMRFMQ 849
            |||||.|:|.|.::|||:||.:.|||||.::|..|||.||.:|:.|.|:..||||:..:||||||
  Fly  1262 DDLLRAGITLAESVVVVNKELSNSAEEDSLSDCNTIVAVQNMFKFFPSIKSITELSQSSNMRFMQ 1326

Human   850 FRAKDCYSLALSKLEKKERERGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMISITRLLL 914
            |||.|.|:|.|||:||:|:||||::::|||||||||.|||.|||||||||:|||||:|:..||||
  Fly  1327 FRAHDKYALHLSKMEKREKERGSHISYMFRLPFAAGAVFSASMLDTLLYQAFVKDYVITFVRLLL 1391

Human   915 GLDTTPGSGFLCSMKITADDLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSESRKIASQSQ 979
            |:|..||||||.||:||.||:|||||.||||||||:|.::|||||||:.    ||.    |..|.
  Fly  1392 GIDQAPGSGFLTSMRITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQD----TSN----ADTSH 1448

Human   980 ISIS-VEEW------------------------EDTKDSKE--QGHHRSNHRNSTSSDQSDHPL- 1016
            :|.| ||.|                        :.||||.|  :|.......::|....|..|. 
  Fly  1449 VSNSPVERWGPFSAFSRHCVRLRPSYDEETGTPDSTKDSTEMLRGVTYRPPGSATGGASSFRPQP 1513

Human  1017 LRRKSMQWARRLS-RKGPKHSGKTAEKITQQRLNLYRRSERQELAELVKNRMKHLGLSTVGYDEM 1080
            .|::|:......| |||..:|...|:   :.|.|..::.||.|:|.||::||:.|.|.|:.||::
  Fly  1514 QRQRSVNCLGGCSERKGSSYSINLAD---EARDNHAQQIERAEIANLVRSRMESLNLPTIDYDDV 1575

Human  1081 NDHQSTLSYILINPSPDTRIELNDVVYLIRPDPLAYLPNSE--PSRRNS 1127
            ::.::.|||::||||.|.::|..|::||:||.|.:.....|  .|||.|
  Fly  1576 SEKRNHLSYVIINPSCDLKLEEGDLIYLVRPSPFSAQKTFERHNSRRKS 1624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNT2XP_006711357.1 Ion_trans 63..270 CDD:459842 122/237 (51%)
Ion_trans_2 206..272 CDD:462301 41/66 (62%)
BK_channel_a 432..526 CDD:460947 69/93 (74%)
SLO2NP_001097259.2 Ion_trans_2 <319..363 CDD:462301 26/43 (60%)
BK_channel_a 525..619 CDD:460947 69/93 (74%)

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