DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNT2 and slo-2

DIOPT Version :10

Sequence 1:XP_006711357.1 Gene:KCNT2 / 343450 HGNCID:18866 Length:1142 Species:Homo sapiens
Sequence 2:NP_001257146.1 Gene:slo-2 / 181332 WormBaseID:WBGene00004831 Length:1143 Species:Caenorhabditis elegans


Alignment Length:1121 Identity:486/1121 - (43%)
Similarity:685/1121 - (61%) Gaps:148/1121 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    38 YMNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLSCLLYIIRVLLENPSQGNE----------- 91
            |..:...|.:|:.:||:|...|.|||..|..:|||:|:||.|||:.:..|..::           
 Worm    79 YGEKKNIKHKLQQWFIENPSISARIRSCNVLIKLLTCILYCIRVVNDERSYPDDFPFSEEEAGKQ 143

Human    92 ----WSHIFWVNRSLPLWGLQVSVALISLFETILLGYLSYKGNIWEQILRIPFILEIINAVPFII 152
                :.::.||:....:|.||...|.||:..|||:.||||.|::...::.|.|:||:|.:.||||
 Worm   144 DVTLYKYLLWVDFDFKIWFLQTMFACISMVYTILVFYLSYSGSVVRLLINIHFLLELITSFPFII 208

Human   153 SIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRAIQRTQSAMFNQVLILISTLLCLIFTCICGI 217
            |||.|||..|:|||||||||||.||:.|:|||:|....:.||:|.|:|:|.|.|.|||||.:|.|
 Worm   209 SIFIPSLTYLYVPVFLNCWLAKGALQAMMNDLNRKSFISSSALFRQLLLLFSVLACLIFTGMCSI 273

Human   218 QHLERI-GKKLNLFDSLYFCIVTFSTVGFGDVTPETWSSKLFVVAMICVALVVLPIQFEQLAYLW 281
            :||:|. ||:::||.|.||.:|||||||:||..|:.|:|:|.||.:|||||.::|.|.::|...|
 Worm   274 EHLQRARGKRIDLFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLIPKQLDELGQTW 338

Human   282 MERQKSGGNYSRHRAQTEKHVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDVQVRR 346
            .||||||.::|.... .|.|||:.:::|:::.:.|||.||||||..|...:|:|.|.|:|.|.|.
 Worm   339 SERQKSGTDFSSWNG-VESHVVVTITTLEVEFIRDFLEEFYAHPENQRIQIVLLSPAELDNQTRM 402

Human   347 VLQIPMWSQRVIYLQGSALKDQDLLRAKMDDAEACFILSSRCEVDRTSSDHQTILRAWAVKDFAP 411
            :|:||:|:.||.|::||:|:|:||.||.:..::||||||:|....:.::|..||||:||:|||||
 Worm   403 LLKIPLWNNRVHYVRGSSLRDEDLERANVATSKACFILSARHVNRKVATDEHTILRSWAIKDFAP 467

Human   412 NCPLYVQILKPENKFHIKFADHVVCEEEFKYAMLALNCICPATSTLITLLVHTSRGQEGQQSPEQ 476
            |...||||.:.|.|.||:.|:.::||:|||||:||.|||||..||.||||:|||||:|||:|.|.
 Worm   468 NVKQYVQIFRAETKMHIEHAEVLICEDEFKYALLANNCICPGISTFITLLMHTSRGEEGQKSTEP 532

Human   477 WQKMYGRCSGNEVYHIVLEESTFFAEYEGKSFTYASFHAHKKFGVCLIGVRRE-DNKNILLNPGP 540
            |.|:||..||||:|.|.:::|.||.||.||||:..||||||::|:.||.|..: |...:.||||.
 Worm   533 WHKVYGFHSGNEMYQIKVQDSKFFCEYVGKSFSSTSFHAHKEYGIGLIAVSPDGDTSRMKLNPGS 597

Human   541 RYIMNSTDICFYINITKEEN-SAFKN--QDQQRKSNVSRSFYHGPSRLPVHSIIASMGTVAIDLQ 602
            .:|:..||..:|:.:|.||: :.|:.  :.||:::||:             |.||::||||:|:.
 Worm   598 SHIIQPTDTVYYMGLTNEESLTDFRKGIRSQQKRANVA-------------STIANIGTVAVDVP 649

Human   603 DTSCRSASGPTLSLPTEGSKE-----------------IRRPSIAPVLE-VADTSSIQTCDLLSD 649
                ||.....:....:..||                 .||||||.|.| ..|:||         
 Worm   650 ----RSDKTELVGRKKKKRKEKAADEIHLIEVGEHVQSSRRPSIAMVTEGKIDSSS--------- 701

Human   650 QSEDETTPDEEMSSNLEY--AKGYPPYSPYIGSSPTFCHLLHEKVPFCCLRLDKSCQHNYYEDAK 712
            .|:.|...|:.....:::  .:.||....|||:|.|.||::.|:...|||:||:.|.|.....|.
 Worm   702 DSDQEEICDKCRGPCIQHKLQRTYPQVRTYIGTSNTVCHMMKERRSLCCLKLDEKCAHKSATSAH 766

Human   713 AYGFKNKLIIVAAETAGNGLYNFIVPLRAYYRPKKELNPIVLLL-----DNPPDMHFLDAICWFP 772
            .|.::|:.||:||:...:|:||.::||||||||..:|:||::||     |:..|. |||||.:||
 Worm   767 EYQWRNRPIILAADRTSSGMYNLVIPLRAYYRPVHDLHPIIILLELEEQDSLNDA-FLDAISYFP 830

Human   773 MVYYMVGSIDNLDDLLRCGVTFAANMVVVDKESTMSAEEDYMADAKTIVNVQTLFRLFSSLSIIT 837
            .||:|.|.:.|||.|||.||:.|.::||| ||:.:.||| :.||..||:.||.:.|:|..|.:||
 Worm   831 DVYWMKGKVGNLDCLLRAGVSSAEHVVVV-KETAVMAEE-HTADCNTIITVQKIHRMFPRLRMIT 893

Human   838 ELTHPANMRFMQFRAKDCYSLALSKLEKKERERGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFV 902
            ||||..||||:||...:.||||.|:.|||||:|||::.||||||||.|.|||.:|||.||||:.:
 Worm   894 ELTHATNMRFVQFNPHNAYSLAQSRFEKKERKRGSHMPFMFRLPFAQGGVFSANMLDRLLYQAII 958

Human   903 KDYMISITRLLLGLDTTPGSGFLCSMKITADDLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLT 967
            |.:::.:.|||||:|.....|:|.|..||:||||||.|.|||||||||..|:||||:||  :|:.
 Worm   959 KPFVVDLVRLLLGIDQHSDGGYLTSFVITSDDLWIRNYGRLYQKLCSSVADIPIGIFRT--KKMD 1021

Human   968 TSESRKIASQSQISISVEEWEDTKD--SKEQGHHRSNHRNSTSSDQSDHPLLRRKSMQWARRLSR 1030
            |.           ::|::..|..||  :.|.|.::         |..||                
 Worm  1022 TK-----------TVSLDLQEQCKDFENTEMGRNK---------DMYDH---------------- 1050

Human  1031 KGPKHSGKTAEKITQQRLNLYRRSERQELAELVKNRMKHLGL-STVGYDEMNDHQSTLSYILINP 1094
                                            |||||:.|.: .|....|.:|.:|.:||::|||
 Worm  1051 --------------------------------VKNRMRLLNIKDTHTLLEGSDEKSQISYVIINP 1083

Human  1095 SPDTRIELNDVVYLIR 1110
            :.|..:|..|:||:||
 Worm  1084 AQDLELESGDIVYVIR 1099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNT2XP_006711357.1 Ion_trans 63..270 CDD:459842 107/222 (48%)
Ion_trans_2 206..272 CDD:462301 38/66 (58%)
BK_channel_a 432..526 CDD:460947 58/93 (62%)
slo-2NP_001257146.1 Ion_trans 112..320 CDD:459842 99/207 (48%)
Ion_trans_2 <285..327 CDD:462301 25/41 (61%)
BK_channel_a 490..582 CDD:460947 58/91 (64%)

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