DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn31A and SRP2

DIOPT Version :9

Sequence 1:NP_609341.1 Gene:Spn31A / 34339 FlyBaseID:FBgn0032178 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:388 Identity:89/388 - (22%)
Similarity:152/388 - (39%) Gaps:97/388 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NVVVSPLLLEATLSLLFLGSDGATAEELQKQLRLKQRFASNAKMANFYAAELGNI-----TTDAD 89
            |.|.||..:.|.|::....:|..|.    :...|....:|:.:..|....||.::     :....
plant    58 NCVFSPASINAVLTVTAANTDNKTL----RSFILSFLKSSSTEETNAIFHELASVVFKDGSETGG 118

  Fly    90 TFLQLQNRLMLSSESGVADDFQKIAQTYFHATAECVDLEQTEKLRRHISEQILASVGGGSWKDIH 154
            ..:...|.:.:........|::.:...:|.|:...||.       ||.:|::...|  .:|...|
plant   119 PKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDF-------RHKAEEVRLDV--NTWASRH 174

  Fly   155 VAGGSSANTLL--LLLAANLQS--KWFLPFSAYRTGLYE------------FH--SGSQVKSVPM 201
                  .|.|:  :|...::.|  .|....:.|..|.:|            ||  :|..| ||| 
plant   175 ------TNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSV-SVP- 231

  Fly   202 LFDDDMFVKFAELRDLDA----RAIELPYEHA-----EELSMLLILPNQRGGLQELEKQLHD--- 254
                  |::..|.:.::|    :.:.|||...     .|.||.|.||:::|.|..|.:::..   
plant   232 ------FMRSYEKQFIEAYDGFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLLERITSNPG 290

  Fly   255 -LDLGALQQRMQMEGVQVLLPKFSIDFECSLRQPLKQLGFEEIFAASANFKHLHASANLPIADVL 318
             ||....:.|:.:...::  |||.|:|           |||    ||:.|.....:.:|.     
plant   291 FLDSHIPEYRVDVGDFRI--PKFKIEF-----------GFE----ASSVFNDFELNVSLH----- 333

  Fly   319 QKLRINLNESGSGSGPELPKNATEYKPIVISNS----SRQKF-FRADHPFFFAIRSENVTYLM 376
            ||..|.::|.|:       :.|.....:|::.|    .::|. |.|||||.|.||.:....|:
plant   334 QKALIEIDEEGT-------EAAAATTVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn31ANP_609341.1 SERPIN 18..379 CDD:238101 89/388 (23%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 89/388 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.