DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn31A and Serpinb3a

DIOPT Version :9

Sequence 1:NP_609341.1 Gene:Spn31A / 34339 FlyBaseID:FBgn0032178 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:383 Identity:97/383 - (25%)
Similarity:176/383 - (45%) Gaps:49/383 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IYHSIATSFAEQNVVVSPLLLEATLSLLFLGSDGATAEELQKQLRLKQRFASNAKMANFYAAELG 82
            :|..:..|  |.|:..|||.:...|::|.||:.|.|.::::|.:    :|....|.....:|:..
  Rat    15 LYRQLRDS--EDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVI----QFHETTKKTTEKSADCH 73

  Fly    83 NITTDADTFLQLQNRLMLSSES---------------GVADDFQKIAQTYFHATAECVDL----- 127
            :..:..:.|.:|..:|..|:::               .....|.:..:.|:.|..|.:|.     
  Rat    74 DEESVHEQFQKLMTQLNKSNDAYDLNSANSIYGAKHFPFLQTFLEDIKEYYQANVESLDFAHAAE 138

  Fly   128 EQTEKLRRHISEQILASVGGGSWKDIHVAGGSSANTLLLLL-AANLQSKWFLPFSAYRTGLYEFH 191
            |..:|:...:..|.     .|..||:...|..:::|:|:|: |...:.:|...|....|...:|.
  Rat   139 ESEKKINSWVENQT-----NGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEEDKFW 198

  Fly   192 SGSQV-KSVPMLFDDDMFVKFAELRDLDARAIELPYEHAEELSMLLILPNQRGGLQELEKQL--H 253
            ..... |.|.|:...:.| .|..|.|:.|:.:|:||: .:||||.::||.:..||::||:||  .
  Rat   199 LNKNTSKPVQMMRQKNEF-NFIFLEDVQAKMVEIPYK-GKELSMFILLPMEIDGLKKLEEQLTAD 261

  Fly   254 DLDLGALQQRMQMEGVQVLLPKFSIDFECSLRQPLKQLGFEEIF-AASANFKHLHASANLPIADV 317
            .|......:.|.|..:.:.||:|.::.:..|..||:.:|..:.| :..|:|..:.::..|.::.|
  Rat   262 KLLEWTRAENMNMIDLYLSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSGMSSTQGLMVSKV 326

  Fly   318 LQKLRINLNESGSGSGPELPKNATEYKPIVISNSSRQ--KFFRADHPFFFAIRSENVT 373
            |.|..:.:||.|:        .|.....:.:|.:|.|  :.|..||||.|.|: .|.|
  Rat   327 LHKSFVEVNEEGT--------EAAAATGVEVSLTSAQITEDFNCDHPFLFLIK-HNAT 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn31ANP_609341.1 SERPIN 18..379 CDD:238101 97/383 (25%)
Serpinb3aXP_006249702.1 SERPIN 5..387 CDD:294093 97/383 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.