DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn31A and srp-8

DIOPT Version :9

Sequence 1:NP_609341.1 Gene:Spn31A / 34339 FlyBaseID:FBgn0032178 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:376 Identity:84/376 - (22%)
Similarity:158/376 - (42%) Gaps:64/376 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QNVVVSPLLLEATLSLLFLGSDGATAEELQKQLRLKQRFASNAKMANFYAAELGNITT-----DA 88
            |:.|.||:.:...|..|:..:.|.|..::...|   .:.|::.:|...::    |::|     ..
 Worm    30 QSFVFSPIAISLALYSLYEAARGETRSQIHDCL---FKNATDGEMVTHFS----NVSTALSAMKK 87

  Fly    89 DTFLQLQNRLM----LSSESGVADDFQKIAQTYFHATAECVDLEQTEKLRRHISEQILASVGGGS 149
            |..:::.|.::    :.:||...|..:.:    ::......||:..::..:.|::.|..:..|  
 Worm    88 DPQVKICNHIICRNGIKTESLCLDKVKLL----YNCEVSSHDLDNEKETIKTINKLIRENTDG-- 146

  Fly   150 WKDIHVAGGSSANT---------LLLLLAANLQSKWFLPFSAYRTGLYEFH-SGSQVKSVPMLFD 204
                |:   ...||         ::.|.||..:::|...|....|...||. :.:..:::..|..
 Worm   147 ----HI---KKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNIKFLHA 204

  Fly   205 DDMFVKFAELRDLDARAIELPYEHAEELSMLLILPNQRGGLQELEKQLHDLDLGALQQRMQMEGV 269
            .....|:.|  :...:.:.|||..: ...|.:.||.::.||.|..|.|....:..|:..:....|
 Worm   205 TGANRKYCE--NDKFQVLSLPYTDS-SFEMTIFLPKEQFGLAEALKTLGTSTIQELKSNVSNYLV 266

  Fly   270 QVLLPKFSIDFECSLRQPLKQLGFEEIFAASA---NFKHLHASANLPIADVLQKLRINLNESGSG 331
            .|.:|.:..:.|..|...|:.:|..:|...||   ||     :.|:.|::.:.|..|.:||:|:.
 Worm   267 NVQIPIWRNETEIDLNSTLQAIGITKILNESAYIGNF-----AENVHISEFIHKAIIEVNENGTS 326

  Fly   332 SGPELPKNATEYKPIVISNSSRQ-----KFFRADHPFFFAIRSENVTYLMG 377
            .       ||..|  ||:...|:     :.|.|||||.:.|..:|....||
 Worm   327 P-------ATNTK--VITKRWREETGEIRDFIADHPFLYTIHYKNSILFMG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn31ANP_609341.1 SERPIN 18..379 CDD:238101 84/376 (22%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 84/376 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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