DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn31A and srp-3

DIOPT Version :10

Sequence 1:NP_609341.1 Gene:Spn31A / 34339 FlyBaseID:FBgn0032178 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_503528.2 Gene:srp-3 / 178672 WormBaseID:WBGene00005644 Length:362 Species:Caenorhabditis elegans


Alignment Length:373 Identity:93/373 - (24%)
Similarity:161/373 - (43%) Gaps:60/373 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QNVVVSPLLLEATLSLLFLGSDGATAEELQKQL-------RLKQRFASNAKMANFYAAELGNITT 86
            :::|.|||.:...|||:..|..|::.::::..|       :|.:.|       :|.:.|:.|.|.
 Worm    22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHF-------SFVSKEVKNGTK 79

  Fly    87 DADTFLQLQNRLMLSSESGVADDFQKIAQTYFHATAECVDLEQTEKLRRHISEQILASVGGGSWK 151
            ..:.:  |.|::.|.....|...|...|...:.|.|:.:|| .|....:.|:..:..:..|   |
 Worm    80 GVEVY--LANKVYLKKGFTVNPTFLSTALKNYGADAKSLDL-TTPAAVQEINSFVNTATNG---K 138

  Fly   152 DIHVAGGSSANTLLLLLAANLQSK--WFLPFSAYRTGLYEF--HSGSQVKSVPM--------LFD 204
            ..::|...|....:.||..::..|  |...|........:|  |:|.:.|...|        ...
 Worm   139 IKNIATQDSIKDAIALLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFMKEFMNDRSFSS 203

  Fly   205 DDMF----VKFAELRDLDARAIELPYEHAEELSMLLILPNQRGGLQELEKQLHDLDLGALQQRMQ 265
            ||:|    |.:::.|          |:.:      :.||..|..|:|..|:|::.....|.:..:
 Worm   204 DDVFDVLHVAYSDQR----------YQFS------VFLPKLRNSLKEALKKLNEKRFNDLLKTKK 252

  Fly   266 MEGVQVLLPKFSIDFECSLRQPLKQLGFEEIFAASANFKHLHASANLPIADVLQKLRINLNESGS 330
            ...:...||||:|:.:.:|:..|:.||..:||:.||:...|  :.||.|::.:.|..|.:||.|:
 Worm   253 RTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSGL--AENLKISEGVHKAIIEVNEEGT 315

  Fly   331 GSGPELPKNATEYKPIVISNSSRQKF-FRADHPFFFAIRSENVTYLMG 377
            .:..     .|..|.:.:|....|.. |.|||||||.|...|....:|
 Worm   316 TAAA-----VTMMKAVPMSARMEQPVNFIADHPFFFTITFLNHPIFVG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn31ANP_609341.1 serpin42Dd-like_insects 10..382 CDD:381070 93/373 (25%)
srp-3NP_503528.2 serpinL_nematode 5..360 CDD:381047 93/373 (25%)

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