DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn31A and srp-2

DIOPT Version :10

Sequence 1:NP_609341.1 Gene:Spn31A / 34339 FlyBaseID:FBgn0032178 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:385 Identity:95/385 - (24%)
Similarity:182/385 - (47%) Gaps:37/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSE-AANPTPYDCHIGAGIYHSIATSFAEQNVVVSPLLLEATLSLLFLGSDGATAEELQKQL--- 61
            ||: |.:.|.:...:.|.:.||       .:||:|||.:...|:|:..|:.|:|.:||:..|   
 Worm     1 MSDNATSQTDFALKLLATLPHS-------GSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGS 58

  Fly    62 RLKQRFASNAKMANFYAAELGNITTDADTFLQLQNRLMLSSESGVADDFQKIAQTYFHATAECVD 126
            |:.:.|:...:...         .||.....::.||:.::....:..|:.:..:..:.|:.|.:|
 Worm    59 RIFEEFSGLMEAVG---------DTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLD 114

  Fly   127 LEQTEKLRRHISEQILASVGGGSWKDIHVAGGSSANTLLLLLAANLQSKWFLPFS-AYRTGLYEF 190
            ..|||:..:.:: ..:.:...|..||:..|..::.....|:.|...::.|...|: ...||...|
 Worm   115 FSQTEQAAKTMN-TFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFF 178

  Fly   191 HSGSQVKSVPMLFDDDMFVKFAELRDLDARAIELPYEHAEELSMLLILPNQRGGLQELEKQLHDL 255
            .|.::.:.:|.|.:.|....:.|  |:..:.:.|.|.. .:.::.:.||.||.||.:..::::..
 Worm   179 TSEAESRQIPFLTELDEHRDYTE--DVLFQVLSLKYAD-PKFTLAIFLPKQRFGLVDALEKINGE 240

  Fly   256 DLGALQQRMQMEGVQVLLPKFSIDFECSLRQPLKQLGFEEIFAASANFKHLHASANLPIADVLQK 320
            .:..|...::...|.|.:|||.|:.|..|::.|:.:|.:||||..|:...:  :..:.|:..:.|
 Worm   241 YIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGI--ADKVFISSGIHK 303

  Fly   321 LRINLNESGSGSGPELPKNATEYK---PIVISNSSRQKFFRADHPFFFAIRSENVTYLMG 377
            ..|.::|.|:.:..     |:.:|   .::|.....|  |.|||||.||:..||.|..:|
 Worm   304 AIIEVDEDGTTAAA-----ASAFKVQLEMMIMAEPTQ--FVADHPFLFAVLFENHTLFLG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn31ANP_609341.1 serpin42Dd-like_insects 10..382 CDD:381070 91/375 (24%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 92/379 (24%)

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