DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and SPAG6

DIOPT Version :10

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0287720 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_036575.1 Gene:SPAG6 / 9576 HGNCID:11215 Length:509 Species:Homo sapiens


Alignment Length:409 Identity:81/409 - (19%)
Similarity:149/409 - (36%) Gaps:84/409 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQNTNNSMLQFEAAWALTNIASGTSDQTRC 150
            ||  :|...::.:|.:|  |:.:...|::.: :|.|.......:|..||.||..:|:...|....
Human    19 QF--VQMVAELATRPQN--IETLQNAGVMSL-LRTLLLDVVPTIQQTAALALGRLANYNDDLAEA 78

  Fly   151 VIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGAAARDIVIHHNVIDGILPLINNETPLSFL 215
            |::.:.:|..|..|..::....:.|.:.|..:..........::....:|.::            
Human    79 VVKCDILPQLVYSLAEQNRFYKKAAAFVLRAVGKHSPQLAQAIVDCGALDTLV------------ 131

  Fly   216 RNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLLSQDIQVLADACWALSYVTDDDNTKIQAVVD 280
                     :|                      |...|..|...|.|||.|:...:....|||||
Human   132 ---------IC----------------------LEDFDPGVKEAAAWALRYIARHNAELSQAVVD 165

  Fly   281 SDAVPRLVKLLQMDEPSIIVP--ALRSVGNIVTGTDQQTDVVIASGGLPRLGLLLQHNKSNIVKE 343
            :.|||.||..:|  ||.|.:.  |..::.:|...:.:....|:.:|.:..|..::.:..:.:..:
Human   166 AGAVPLLVLCIQ--EPEIALKRIAASALSDIAKHSPELAQTVVDAGAVAHLAQMILNPDAKLKHQ 228

  Fly   344 AAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDFKAQKEAAWAVTNTTTSGTPE-------- 400
            ....:|.::..:....:.|::|.||..:.|.|:..|...:|.|: .:.......|||        
Human   229 ILSALSQVSKHSVDLAEMVVEAEIFPVVLTCLKDKDEYVKKNAS-TLIREIAKHTPELSQLVVNA 292

  Fly   401 ----QIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAEKLGGTENLCLMVEEMGGLD 461
                .::|.|...|                   ..|.|..:..|......:|||.:.|....|:.
Human   293 GGVAAVIDCIGSCK-------------------GNTRLPGIMMLGYVAAHSENLAMAVIISKGVP 338

  Fly   462 KLETLQQHENEEVYKKAYA 480
            :|......|.|:..|.|.|
Human   339 QLSVCLSEEPEDHIKAAAA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 81/409 (20%)
HEAT repeat 70..102 CDD:293787 4/15 (27%)
armadillo repeat 108..140 CDD:293788 8/31 (26%)
armadillo repeat 148..184 CDD:293788 6/35 (17%)
armadillo repeat 190..225 CDD:293788 1/34 (3%)
armadillo repeat 359..396 CDD:293788 9/36 (25%)
armadillo repeat 402..437 CDD:293788 5/34 (15%)
SPAG6NP_036575.1 ARM 1 31..70 10/41 (24%)
armadillo repeat 37..68 CDD:293788 8/31 (26%)
ARM 2 73..112 7/38 (18%)
armadillo repeat 78..110 CDD:293788 6/31 (19%)
SRP1 112..>423 CDD:227396 59/311 (19%)
ARM 3 115..154 10/81 (12%)
armadillo repeat 120..152 CDD:293788 9/74 (12%)
ARM 4 157..196 16/40 (40%)
armadillo repeat 160..196 CDD:293788 16/37 (43%)
ARM 5 199..238 4/38 (11%)
armadillo repeat 202..234 CDD:293788 3/31 (10%)
ARM 6 241..280 9/39 (23%)
armadillo repeat 244..278 CDD:293788 9/34 (26%)
HEAT repeat 289..325 CDD:293787 6/54 (11%)
ARM 7 325..365 11/33 (33%)
HEAT repeat 335..369 CDD:293787 7/23 (30%)
ARM 8 368..409
HEAT repeat 378..406 CDD:293787
Blue background indicates that the domain is not in the aligned region.

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