DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and IMPA-9

DIOPT Version :10

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0287720 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_195927.2 Gene:IMPA-9 / 831675 AraportID:AT5G03070 Length:519 Species:Arabidopsis thaliana


Alignment Length:548 Identity:138/548 - (25%)
Similarity:247/548 - (45%) Gaps:102/548 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SNSRQGSYKANSINTQDSRMRRHEVTIE------LRKSKK----------EDQMFKRRNINDEDL 54
            :::|:...|::..|....|.|:..||:.      |.::|:          ||.:.:...:.||: 
plant     7 ASNRRDPIKSSVGNVAGQRRRKQAVTVAKERRELLVRAKRLCRVGTNGDVEDALVENEMMVDEE- 70

  Fly    55 TSPLKELNGQSPVQLSVDEIVAAMNSEDQ---ERQFLGMQSARKMLSRERNPPIDLMIGHGIVPI 116
             .|:.|.....    ||:|:.:|:..:.:   :::...::..|::||:...||::..:..|.:|:
plant    71 -QPILEAQASK----SVEELKSAVQYQGKGAMQKRVTALRELRRLLSKSEFPPVEAALRAGAIPL 130

  Fly   117 CIRFLQNTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSK-SMNLAEQAVWALG 180
            .::.|...:......|:||.|||||:|..::|:.::.  |:|..:|.|..| |..:|||..||:|
plant   131 LVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALLP--ALPLLIAHLGEKSSAPVAEQCAWAIG 193

  Fly   181 NIAGDGAAARDIVIHHNVIDGILPLINNETPL---------SFLRNIVWLMSNLCRNKNPSPPFD 236
            |:||:|...|::::.    .|.||      ||         |.:|...|.:|||.:.........
plant   194 NVAGEGEDLRNVLLS----QGALP------PLARMIFPDKGSTVRTAAWALSNLIKGPESKAAAQ 248

  Fly   237 QVK--RLLPVLSQLLLSQDIQVLADACWALSYVT--DDDNTK-------IQAVVDSDAVPRLVKL 290
            .||  .:|..:.:.|...|.:...:..|.:.|::  .|..|.       :|.::|..|....::|
plant   249 LVKIDGILDAILRHLKKTDEETATEIAWIIVYLSALSDIATSMLLKGGILQLLIDRLATSSSLQL 313

  Fly   291 LQMDEPSIIVPALRSVGNIVTG----------TDQQTDVVIASGGLPRLGLLLQHNKSN---IVK 342
            |        :|.|||:||.|..          .:|.|:..|       :|:|.:..:|.   :.|
plant   314 L--------IPVLRSLGNFVAVDPKAVLTILIREQNTEESI-------IGVLAKCLRSEHRVLKK 363

  Fly   343 EAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDFKAQKEAAWAVTNTTTSGT--------- 398
            ||||.:|||.||:.:..:.:....:...|..:|....|..:||.|:.:.|......         
plant   364 EAAWVLSNIAAGSIEHKRMIHSTEVMPLLLRILSTSPFDIRKEVAYVLGNLCVESAEGDRKPRII 428

  Fly   399 PEQIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAEKLGGTENLCLMVEEMGGLDKL 463
            .|.:|.::.. ..|:.||:|:.:.|   |:..:.||..:..:...:...|...| ||...|:|.:
plant   429 QEHLVSIVSG-GCLRGFIELVRSPD---IEAARLGLQFIELVLRGMPNGEGPKL-VEGEDGIDAM 488

  Fly   464 ETLQQHENEEVYKKAYAIIDTYFSNGDD 491
            |..|.|||||:...|.:::|.||  |:|
plant   489 ERFQFHENEELRVMANSLVDKYF--GED 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 138/548 (25%)
HEAT repeat 70..102 CDD:293787 7/34 (21%)
armadillo repeat 108..140 CDD:293788 8/31 (26%)
armadillo repeat 148..184 CDD:293788 14/36 (39%)
armadillo repeat 190..225 CDD:293788 10/43 (23%)
armadillo repeat 359..396 CDD:293788 7/36 (19%)
armadillo repeat 402..437 CDD:293788 9/34 (26%)
IMPA-9NP_195927.2 SRP1 24..519 CDD:227396 135/531 (25%)
armadillo repeat 121..154 CDD:293788 8/32 (25%)
armadillo repeat 162..197 CDD:293788 14/36 (39%)
armadillo repeat 203..237 CDD:293788 10/43 (23%)
armadillo repeat 247..283 CDD:293788 7/35 (20%)
armadillo repeat 289..323 CDD:293788 10/41 (24%)
armadillo repeat 342..372 CDD:293788 11/36 (31%)
armadillo repeat 380..422 CDD:293788 7/41 (17%)

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