DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and kpna5

DIOPT Version :9

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0267727 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001018163.1 Gene:kpna5 / 553205 ZFINID:ZDB-GENE-050522-22 Length:539 Species:Danio rerio


Alignment Length:535 Identity:250/535 - (46%)
Similarity:337/535 - (62%) Gaps:19/535 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKADSNSRQGSYKANSINTQDSRMRRHEVTIELRKSKKEDQMFKRRNIN----DED-LTSPLKEL 61
            |....|.|..|||..::|.|:.|.||.|..|:|||.|:|:|:|||||::    ||. |..|:::.
Zfish     6 SPGKDNYRMKSYKNKALNPQEMRRRREEEGIQLRKQKREEQLFKRRNVSLPPGDESMLECPIQDP 70

  Fly    62 NGQSPVQLS-----VDEIVAAMNSEDQERQFLGMQSARKMLSRERNPPIDLMIG-HGIVPICIRF 120
            :..|.|.:|     ..:::..:.|||.::|.:..|..||:||:|.|||||.:|| .|:|...:.|
Zfish    71 DVSSTVPVSGEGVITQDVIQMIFSEDPDQQLIATQKFRKLLSKEPNPPIDEVIGTPGVVNRFVEF 135

  Fly   121 LQNTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGD 185
            |:.::|..||||||||||||||||...|:.|||..|||.|:.||.|:..::.|||||||||||||
Zfish   136 LRRSDNCTLQFEAAWALTNIASGTFQHTKVVIETGAVPIFIELLNSEYEDVQEQAVWALGNIAGD 200

  Fly   186 GAAARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLL 250
            .|..||.|::..::..:..|:.....|:..||.||.:|||||.|||.|.|.:|...|.|||:||.
Zfish   201 NAECRDYVLNCGILPSLQQLLAKSNRLTTTRNAVWALSNLCRGKNPPPDFAKVSPCLSVLSRLLF 265

  Fly   251 SQDIQVLADACWALSYVTDDDNTKIQAVVDSDAVPRLVKLLQMDEPSIIVPALRSVGNIVTGTDQ 315
            |.|..|||||||||||::|..|.|||.|:||....|||:||...:..::.||||:|||||||.|.
Zfish   266 SSDPDVLADACWALSYLSDGPNDKIQTVIDSGVCRRLVELLMHSDYKVVSPALRAVGNIVTGDDI 330

  Fly   316 QTDVVIASGGLPRLGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDF 380
            ||.|::....||.|..||...|.:|.|||.||||||||||:.||||||.:.:|..|..:|:|.:|
Zfish   331 QTQVILNCSALPCLLHLLSSPKESIKKEACWTVSNITAGNRAQIQAVIDSNVFPVLIEILQKAEF 395

  Fly   381 KAQKEAAWAVTNTTTSGTPEQIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAE--- 442
            :.:||||||:||.|:.||||||..|: ....:||..|||...|.:.::|...||.|:..|.|   
Zfish   396 RTRKEAAWAITNATSGGTPEQIRYLV-SLNTIKPMCDLLTVMDSKIVQVALNGLENILRLGEQES 459

  Fly   443 KLGGT--ENLCLMVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDDEAEQELAPQEVNGA 505
            |..||  ...|.::||..||||:|.||.|||:|:|:||:.:|:.||  |.:|.:..:.||.....
Zfish   460 KQNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYF--GVEEEDASIVPQVDQNQ 522

  Fly   506 LEFNATQPKAPEGGY 520
            .::...|.:.|..|:
Zfish   523 GQYIFQQSEGPMEGF 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 248/530 (47%)
HEAT repeat 70..102 CDD:293787 11/36 (31%)
armadillo repeat 108..140 CDD:293788 17/32 (53%)
armadillo repeat 148..184 CDD:293788 21/35 (60%)
armadillo repeat 190..225 CDD:293788 10/34 (29%)
armadillo repeat 359..396 CDD:293788 19/36 (53%)
armadillo repeat 402..437 CDD:293788 11/34 (32%)
kpna5NP_001018163.1 IBB 9..105 CDD:280005 34/95 (36%)
SRP1 36..521 CDD:227396 235/487 (48%)
HEAT repeat 88..117 CDD:293787 10/28 (36%)
ARM 121..242 CDD:237987 60/120 (50%)
armadillo repeat 129..155 CDD:293788 14/25 (56%)
armadillo repeat 163..199 CDD:293788 21/35 (60%)
armadillo repeat 205..240 CDD:293788 10/34 (29%)
ARM 254..368 CDD:237987 63/113 (56%)
armadillo repeat 257..282 CDD:293788 18/24 (75%)
armadillo repeat 290..326 CDD:293788 18/35 (51%)
armadillo repeat 332..366 CDD:293788 16/33 (48%)
ARM 333..451 CDD:237987 57/118 (48%)
armadillo repeat 374..410 CDD:293788 18/35 (51%)
armadillo repeat 417..451 CDD:293788 11/34 (32%)
Arm_3 467..513 CDD:292804 22/47 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100442
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.730

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