DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and KPNA1

DIOPT Version :9

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0267727 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_002255.3 Gene:KPNA1 / 3836 HGNCID:6394 Length:538 Species:Homo sapiens


Alignment Length:532 Identity:239/532 - (44%)
Similarity:326/532 - (61%) Gaps:21/532 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NSRQGSYKANSINTQDSRMRRHEVTIELRKSKKEDQMFKRRNI--NDEDLTSPLKELNGQSPVQL 69
            |.|..|||..|:|..:.|.||.|..::|||.|:|:|:|||||:  .:|:....:....|....|:
Human     8 NFRLKSYKNKSLNPDEMRRRREEEGLQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQI 72

  Fly    70 S----------VDEIVAAMNSEDQERQFLGMQSARKMLSRERNPPIDLMIG-HGIVPICIRFLQN 123
            |          ..:::..:.|:..|:|....|..||:||:|.|||||.:|. .|:|...:.||:.
Human    73 SNMEMAPGGVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKR 137

  Fly   124 TNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGAA 188
            ..|..||||:||.|||||||.|.|||.||:..|||.|:.||.|:..::.|||||||||||||...
Human   138 KENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTM 202

  Fly   189 ARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLLSQD 253
            .||.|:..|::..:|.|.:.:..|:..||.||.:|||||.|:|.|.|.:|...|.|||.||...|
Human   203 CRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSD 267

  Fly   254 IQVLADACWALSYVTDDDNTKIQAVVDSDAVPRLVKLLQMDEPSIIVPALRSVGNIVTGTDQQTD 318
            ..|||||||||||::|..|.|||||:|:....|||:||..::..::.||||:|||||||.|.||.
Human   268 TDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQ 332

  Fly   319 VVIASGGLPRLGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDFKAQ 383
            |::....|..|..||...|.:|.|||.||:|||||||:.|||.||.|.||..|.::|:..:|:.:
Human   333 VILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTR 397

  Fly   384 KEAAWAVTNTTTSGTPEQIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAE---KLG 445
            ||||||:||.|:.|:.|||..|:| ...:||..|||...|.:.::|...||.|:..|.|   |..
Human   398 KEAAWAITNATSGGSAEQIKYLVE-LGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRN 461

  Fly   446 GT--ENLCLMVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDDEAEQELAPQEVNGALEF 508
            ||  ...|.::||..||||:|.||.|||:|:|:||:.:|:.||  |.::.:..:|||......::
Human   462 GTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYF--GTEDEDSSIAPQVDLNQQQY 524

  Fly   509 NATQPKAPEGGY 520
            ...|.:||..|:
Human   525 IFQQCEAPMEGF 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 237/527 (45%)
HEAT repeat 70..102 CDD:293787 10/41 (24%)
armadillo repeat 108..140 CDD:293788 14/32 (44%)
armadillo repeat 148..184 CDD:293788 21/35 (60%)
armadillo repeat 190..225 CDD:293788 12/34 (35%)
armadillo repeat 359..396 CDD:293788 19/36 (53%)
armadillo repeat 402..437 CDD:293788 12/34 (35%)
KPNA1NP_002255.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 11/27 (41%)
Arm_3 33..516 CDD:330530 222/485 (46%)
nuclear localization signal 42..51 6/8 (75%)
ARM 1, truncated 77..117 10/39 (26%)
HEAT repeat 88..116 CDD:293787 9/27 (33%)
ARM 2 118..161 22/42 (52%)
armadillo repeat 128..154 CDD:293788 12/25 (48%)
NLS binding site (major). /evidence=ECO:0000250 149..241 48/91 (53%)
armadillo repeat 162..198 CDD:293788 21/35 (60%)
armadillo repeat 204..239 CDD:293788 12/34 (35%)
ARM 4 207..245 15/37 (41%)
Binding to RAG1 245..437 99/192 (52%)
armadillo repeat 256..281 CDD:293788 17/24 (71%)
armadillo repeat 289..325 CDD:293788 18/35 (51%)
NLS binding site (minor). /evidence=ECO:0000250 318..406 47/87 (54%)
armadillo repeat 373..409 CDD:293788 18/35 (51%)
ARM 9 413..457 17/44 (39%)
armadillo repeat 416..450 CDD:293788 12/34 (35%)
ARM 10, atypical 460..504 20/43 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100442
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.730

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