DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and Kpna5

DIOPT Version :9

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0267727 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_006256504.1 Gene:Kpna5 / 294392 RGDID:1561324 Length:539 Species:Rattus norvegicus


Alignment Length:539 Identity:250/539 - (46%)
Similarity:336/539 - (62%) Gaps:27/539 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKADSNSRQGSYKANSINTQDSRMRRHEVTIELRKSKKEDQMFKRRNI----NDE-DLTSPLKEL 61
            |....|.|..|||..::|.|:.|.||.|..|:|||.|:|:|:|||||:    ||: .|.||:::.
  Rat     6 SPGKDNYRMKSYKNKALNPQEMRRRREEEGIQLRKQKREEQLFKRRNVSLPRNDDCMLESPIQDP 70

  Fly    62 NGQSPVQLSVDEIVAA-----MNSEDQERQFLGMQSARKMLSRERNPPIDLMIGH-GIVPICIRF 120
            :..|.|.:..::::.|     :.|.:.|:|....|..||:||:|.|||||.:|.. |:|...::|
  Rat    71 DVSSTVPIPEEDMITADMIQMIFSNNAEQQLTATQKFRKLLSKEPNPPIDQVIQKPGVVQRFVKF 135

  Fly   121 LQNTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGD 185
            |:...|..||||||||||||||||...|:.|||..|||.|:.||.|:..::.|||||||||||||
  Rat   136 LERNENCTLQFEAAWALTNIASGTFLHTKVVIETGAVPIFIRLLTSEHEDVQEQAVWALGNIAGD 200

  Fly   186 GAAARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLL 250
            .|..||.|::..::..:|.|:.|...|:..||.||.:|||||.|||.|.|.:|...|.|||:||.
  Rat   201 NAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLF 265

  Fly   251 SQDIQVLADACWALSYVTDDDNTKIQAVVDSDAVPRLVKLLQMDEPSIIVPALRSVGNIVTGTDQ 315
            |.|..||||.||||||::|..|.|||.|:||....|||:||..::..::.||||:|||||||.|.
  Rat   266 SSDPDVLADVCWALSYLSDGPNDKIQVVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDI 330

  Fly   316 QTDVVIASGGLPRLGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDF 380
            ||.|::....||.|..||...|.::.|||.||:|||||||:.||||||...||..|..||:|.:|
  Rat   331 QTQVILNCSALPCLLHLLGSPKESVRKEACWTISNITAGNRMQIQAVIDGSIFPVLIEVLQKAEF 395

  Fly   381 KAQKEAAWAVTNTTTSGTPEQIVDLIEKYKI----LKPFIDLLDTKDPRTIKVVQTGLSNLFALA 441
            :.:||||||:||.|:.|.||||     :|.:    :||..|||...|.:.::|...||.|:..|.
  Rat   396 RTRKEAAWAITNATSGGAPEQI-----RYLVTLGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 455

  Fly   442 EKLG-----GTENLCLMVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDDEAEQELAPQE 501
            |:..     |....|.::||..||||:|.||.|||:|:|:||:.:|:.||  |.:|.:..|.||.
  Rat   456 ERESKQNGVGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIERYF--GVEEDDPSLVPQV 518

  Fly   502 VNGALEFNATQPKAPEGGY 520
            .....:|...|.:||..|:
  Rat   519 DEQQRQFLFQQCEAPGEGF 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 248/534 (46%)
HEAT repeat 70..102 CDD:293787 10/36 (28%)
armadillo repeat 108..140 CDD:293788 16/32 (50%)
armadillo repeat 148..184 CDD:293788 21/35 (60%)
armadillo repeat 190..225 CDD:293788 12/34 (35%)
armadillo repeat 359..396 CDD:293788 21/36 (58%)
armadillo repeat 402..437 CDD:293788 11/38 (29%)
Kpna5XP_006256504.1 IBB 9..105 CDD:280005 34/95 (36%)
SRP1 36..528 CDD:227396 234/498 (47%)
ARM 121..242 CDD:237987 61/120 (51%)
armadillo repeat 122..155 CDD:293788 16/32 (50%)
armadillo repeat 163..199 CDD:293788 21/35 (60%)
armadillo repeat 205..240 CDD:293788 12/34 (35%)
ARM 254..368 CDD:237987 60/113 (53%)
armadillo repeat 257..282 CDD:293788 17/24 (71%)
armadillo repeat 290..326 CDD:293788 18/35 (51%)
armadillo repeat 332..366 CDD:293788 14/33 (42%)
ARM 333..451 CDD:237987 56/122 (46%)
armadillo repeat 374..410 CDD:293788 20/35 (57%)
armadillo repeat 417..451 CDD:293788 11/38 (29%)
Arm_3 467..511 CDD:292804 22/45 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100442
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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