DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and ima-2

DIOPT Version :9

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0267727 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_491824.1 Gene:ima-2 / 172329 WormBaseID:WBGene00002073 Length:531 Species:Caenorhabditis elegans


Alignment Length:525 Identity:197/525 - (37%)
Similarity:295/525 - (56%) Gaps:43/525 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DSNSRQGSYKANSINTQDSRMRRHEVTIELRKSKKEDQMFKRRNINDED--------LTSPLKEL 61
            |...|...|| |....::.|.||.|.::|:||.|..|.|.|||||.|.|        |..|.|..
 Worm    17 DEGGRLQQYK-NLTKHEELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKIS 80

  Fly    62 NGQSPVQLSVDEIVAAMNS----EDQERQFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQ 122
            :.||..:||.|||.|.:::    :|..|.|   :|.||.||:.:|||||.:|..|::...::.| 
 Worm    81 HQQSSTRLSNDEIRAILSNNPSEDDMVRCF---ESLRKSLSKTKNPPIDEVIHCGLLQALVQAL- 141

  Fly   123 NTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGA 187
            :..|..:|:|||||||||.||:::||...:|.......:.|...:|..::|||:||:.|||||.:
 Worm   142 SVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSS 206

  Fly   188 AARDIVIHHNVIDGILPLINNETPL--SFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLL 250
            ..||.||..:.::.::.|:.....|  |.:|.|.|..||:||:|||..|.:.::.|...|.:|:.
 Worm   207 QLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQ 271

  Fly   251 SQDIQVLADACWALSYVTDDDNTKIQAVVDSDAVPRLVKLLQMDEPSIIVPALRSVGNIVTGTDQ 315
            ..|.||..|||||:||:||..:.:|:...:|..:|.:|...:..| :::.||||::||:.||.|.
 Worm   272 HTDRQVRQDACWAVSYLTDGPDEQIELARESGVLPHVVAFFKEAE-NLVAPALRTLGNVATGNDS 335

  Fly   316 QTDVVIASGGLPR-LGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGD 379
            .|..||..|.|.. |.|:.:...|:||||..|.||||.||.|||||||:.|.:...|..||:.||
 Worm   336 LTQAVIDLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGD 400

  Fly   380 FKAQKEAAWAVTNTTTSGTPEQIVDLIEK-------YKILKPFIDLLDTKDPRTIKVVQTGLSNL 437
            .|.|.||:||::|....||..|:|.::|.       ..:|:...|:|:    .|::.:.|     
 Worm   401 HKCQFEASWALSNLAQGGTNRQVVAMLEDNVVPALCQALLQTNTDMLN----NTLETLYT----- 456

  Fly   438 FALAEKLGGTENLCLM---VEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSN---GDDEAEQE 496
            ..|..:.|....:.::   |||.||||.||.||:.::|::|.:||.||..:|::   |:.|:.:.
 Worm   457 LMLTVQNGYPHKVDILHDQVEENGGLDSLERLQESQSEQIYTQAYRIITQFFTDDDAGEKESHEN 521

  Fly   497 LAPQE 501
            ..||:
 Worm   522 ADPQD 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 197/525 (38%)
HEAT repeat 70..102 CDD:293787 13/35 (37%)
armadillo repeat 108..140 CDD:293788 12/31 (39%)
armadillo repeat 148..184 CDD:293788 11/35 (31%)
armadillo repeat 190..225 CDD:293788 11/36 (31%)
armadillo repeat 359..396 CDD:293788 17/36 (47%)
armadillo repeat 402..437 CDD:293788 7/41 (17%)
ima-2NP_491824.1 SRP1 21..522 CDD:227396 194/515 (38%)
IBB 21..103 CDD:280005 32/82 (39%)
ARM 126..248 CDD:237987 44/122 (36%)
armadillo repeat 128..159 CDD:293788 12/31 (39%)
armadillo repeat 167..203 CDD:293788 11/35 (31%)
armadillo repeat 209..246 CDD:293788 11/36 (31%)
ARM 266..374 CDD:237987 45/108 (42%)
armadillo repeat 296..331 CDD:293788 11/35 (31%)
armadillo repeat 337..372 CDD:293788 15/34 (44%)
ARM 338..454 CDD:237987 47/119 (39%)
armadillo repeat 380..416 CDD:293788 17/35 (49%)
armadillo repeat 423..454 CDD:293788 6/34 (18%)
Arm_3 470..517 CDD:292804 19/46 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100442
Panther 1 1.100 - - LDO PTHR23316
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.830

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