DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pen and kpna6

DIOPT Version :9

Sequence 1:NP_477041.1 Gene:Pen / 34338 FlyBaseID:FBgn0267727 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_001923921.1 Gene:kpna6 / 100149852 ZFINID:ZDB-GENE-130530-626 Length:537 Species:Danio rerio


Alignment Length:533 Identity:256/533 - (48%)
Similarity:335/533 - (62%) Gaps:17/533 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKADSNSRQGSYKANSINTQDSRMRRHEVTIELRKSKKEDQMFKRRNI---NDED--LTSPLKE- 60
            |.|..|.|...||..::|.::.|.||.|..|:|||.|:|.|:|||||:   .:|.  ..|||.: 
Zfish     6 SPAKDNFRMNRYKNKALNLEEMRRRREEEGIQLRKQKREQQLFKRRNVELLGEEGGMFDSPLMDS 70

  Fly    61 --LNGQSPVQLSVDEIVAAMNSEDQERQFLGMQSARKMLSRERNPPIDLMIG-HGIVPICIRFLQ 122
              .:..:|..:...::|..:.|||.|.|.:..|..||:||:|.|||||.:|. .|:|...:.|||
Zfish    71 YVSSTTAPDGVITRDMVEMLFSEDPELQLVTTQRFRKLLSKEPNPPIDEVISTPGVVNRFVEFLQ 135

  Fly   123 NTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGA 187
            .:.|..|||||||||||||||||.||:.|||..|||.|:.||.|...::.|||||||||||||.|
Zfish   136 KSTNCTLQFEAAWALTNIASGTSQQTKFVIEAGAVPVFIELLNSDFEDVQEQAVWALGNIAGDSA 200

  Fly   188 AARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLLSQ 252
            ..||.|::.|::..:|.|:...|.|:..||.||.:|||||.|:|.|.|::|...|||||:||.|.
Zfish   201 VCRDYVLNCNILPPLLVLLTKSTRLTMTRNAVWALSNLCRGKSPPPDFEKVSPCLPVLSRLLFSS 265

  Fly   253 DIQVLADACWALSYVTDDDNTKIQAVVDSDAVPRLVKLLQMDEPSIIVPALRSVGNIVTGTDQQT 317
            |..:||||||||||::|..|.|||||:||....|||:||...:..:..|:||:|||||||.|.||
Zfish   266 DSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHSDYKVASPSLRAVGNIVTGDDIQT 330

  Fly   318 DVVIASGGLPRLGLLLQHNKSNIVKEAAWTVSNITAGNQKQIQAVIQAGIFQQLRTVLEKGDFKA 382
            .||:....||.|..||...|.:|.|||.||:|||||||:.||||||.|.||..|..:|:|.:|:.
Zfish   331 QVVLNCSALPCLLHLLSSAKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRT 395

  Fly   383 QKEAAWAVTNTTTSGTPEQIVDLIEKYKILKPFIDLLDTKDPRTIKVVQTGLSNLFALAEKL--- 444
            :||||||:||.|:.||||||..|: ....:||..|||...|.:.:.|...||.|:..|.|:.   
Zfish   396 RKEAAWAITNATSGGTPEQIRYLV-NLGCIKPLCDLLTVMDSKIVLVALNGLENILRLGEQEAKQ 459

  Fly   445 --GGTENLCLMVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDDEAEQELAPQEVNGALE 507
              .|....|.::||..||||:|.||.|||:|:|:||:.:|:.||  |.:|.:..|.||......:
Zfish   460 NGSGLNPYCSLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYF--GVEEEDANLVPQVDENQQQ 522

  Fly   508 FNATQPKAPEGGY 520
            |...|.:||..|:
Zfish   523 FLFPQQEAPMEGF 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PenNP_477041.1 SRP1 2..517 CDD:227396 254/528 (48%)
HEAT repeat 70..102 CDD:293787 12/31 (39%)
armadillo repeat 108..140 CDD:293788 17/32 (53%)
armadillo repeat 148..184 CDD:293788 21/35 (60%)
armadillo repeat 190..225 CDD:293788 13/34 (38%)
armadillo repeat 359..396 CDD:293788 21/36 (58%)
armadillo repeat 402..437 CDD:293788 11/34 (32%)
kpna6XP_001923921.1 IBB 9..103 CDD:280005 32/93 (34%)
SRP1 36..536 CDD:227396 245/503 (49%)
ARM 119..240 CDD:237987 65/120 (54%)
armadillo repeat 127..153 CDD:293788 15/25 (60%)
armadillo repeat 161..197 CDD:293788 21/35 (60%)
armadillo repeat 203..238 CDD:293788 13/34 (38%)
ARM 252..366 CDD:237987 63/113 (56%)
armadillo repeat 255..280 CDD:293788 18/24 (75%)
armadillo repeat 288..324 CDD:293788 18/35 (51%)
armadillo repeat 330..364 CDD:293788 16/33 (48%)
ARM 331..449 CDD:237987 59/118 (50%)
armadillo repeat 372..408 CDD:293788 20/35 (57%)
armadillo repeat 415..449 CDD:293788 11/34 (32%)
Arm_3 465..511 CDD:292804 22/47 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100442
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

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