DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-B and obst-F

DIOPT Version :9

Sequence 1:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster


Alignment Length:358 Identity:72/358 - (20%)
Similarity:107/358 - (29%) Gaps:133/358 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CIFALALAVGLTATKAQESRGGFRGSNSQFRVGPGHPPSQRHLPPRNRDPVQEASVVPKSKQTAA 76
            |.:|..||:.:.                 |::|.||...|....|:.|..|...|.:...:|   
  Fly     3 CSWAYVLALSIC-----------------FQLGAGHAVDQSWELPKVRHTVGHLSHICLGRQ--- 47

  Fly    77 EKEYEPTEECPEPNGFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYSPIEEKCDLPYNIDC-- 139
                        .....|....|:.|::| ..|||...|..|:.|::...|   ||||.|.:|  
  Fly    48 ------------EGDLVPHPLDCNGYFSC-SRVPTLLYCDQGLQFDENRAI---CDLPENTNCRP 96

  Fly   140 ------------MKRSKL----QTPQP----------------------SLHCPRKNGYF-GHEK 165
                        ...|:|    ..|:|                      .:.|.....|| .|  
  Fly    97 VATGTVESANGLADNSELNWWPHKPKPVFVAVDVTSGQPVNPMEKYDPEHIECRHYGAYFLPH-- 159

  Fly   166 PGICDKFYFCVDGQFNMITCPAGLVFNPKTGICGWPDQVGVTGCK--SEDVFDFE---------- 218
            |..|..::.|..|..:...|..|..:|.:...|...||....|..  ||...|.|          
  Fly   160 PRNCGLYFICAYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQISEPHTDVETTMKVPTANS 224

  Fly   219 ------C-----------------PKVNESIAVTHPR------------------YADPNDCQFF 242
                  |                 |::.|...||.|.                  .:.|.||..:
  Fly   225 EGAVTVCYIVGSSEYTTLQQFLTSPEITELPPVTPPSPPRAEANALTCPSTKQSYMSHPEDCSKY 289

  Fly   243 YVCVNGDLPRRNGCKLGQVFDEEKETCDWARKV 275
            |:|:.| :|....|..|..:|::...|:..:.|
  Fly   290 YICIGG-MPVLTSCPKGLFWDQKSGFCEMEKNV 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-BNP_609339.1 CBM_14 89..139 CDD:279884 16/49 (33%)
CBM_14 156..204 CDD:279884 12/48 (25%)
CBM_14 233..278 CDD:279884 12/43 (28%)
obst-FNP_649186.1 CBM_14 43..94 CDD:279884 17/69 (25%)
CBM_14 156..198 CDD:279884 11/43 (26%)
CBM_14 272..321 CDD:279884 11/49 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444034
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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