DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-B and obst-F

DIOPT Version :10

Sequence 1:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_649186.1 Gene:obst-F / 40209 FlyBaseID:FBgn0036947 Length:326 Species:Drosophila melanogaster


Alignment Length:358 Identity:72/358 - (20%)
Similarity:107/358 - (29%) Gaps:133/358 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CIFALALAVGLTATKAQESRGGFRGSNSQFRVGPGHPPSQRHLPPRNRDPVQEASVVPKSKQTAA 76
            |.:|..||:.:.                 |::|.||...|....|:.|..|...|.:...:|   
  Fly     3 CSWAYVLALSIC-----------------FQLGAGHAVDQSWELPKVRHTVGHLSHICLGRQ--- 47

  Fly    77 EKEYEPTEECPEPNGFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYSPIEEKCDLPYNIDC-- 139
                        .....|....|:.|::| ..|||...|..|:.|::...|   ||||.|.:|  
  Fly    48 ------------EGDLVPHPLDCNGYFSC-SRVPTLLYCDQGLQFDENRAI---CDLPENTNCRP 96

  Fly   140 ------------MKRSKL----QTPQP----------------------SLHCPRKNGYF-GHEK 165
                        ...|:|    ..|:|                      .:.|.....|| .|  
  Fly    97 VATGTVESANGLADNSELNWWPHKPKPVFVAVDVTSGQPVNPMEKYDPEHIECRHYGAYFLPH-- 159

  Fly   166 PGICDKFYFCVDGQFNMITCPAGLVFNPKTGICGWPDQVGVTGCK--SEDVFDFE---------- 218
            |..|..::.|..|..:...|..|..:|.:...|...||....|..  ||...|.|          
  Fly   160 PRNCGLYFICAYGHLHRHQCGRGTAWNFEKSECQLSDQAICYGESQISEPHTDVETTMKVPTANS 224

  Fly   219 ------C-----------------PKVNESIAVTHPR------------------YADPNDCQFF 242
                  |                 |::.|...||.|.                  .:.|.||..:
  Fly   225 EGAVTVCYIVGSSEYTTLQQFLTSPEITELPPVTPPSPPRAEANALTCPSTKQSYMSHPEDCSKY 289

  Fly   243 YVCVNGDLPRRNGCKLGQVFDEEKETCDWARKV 275
            |:|:.| :|....|..|..:|::...|:..:.|
  Fly   290 YICIGG-MPVLTSCPKGLFWDQKSGFCEMEKNV 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-BNP_609339.1 CBM_14 89..139 CDD:426342 16/49 (33%)
CBM_14 156..204 CDD:426342 12/48 (25%)
CBM_14 233..278 CDD:426342 12/43 (28%)
obst-FNP_649186.1 CBM_14 43..91 CDD:426342 16/66 (24%)
CBM_14 156..198 CDD:426342 11/43 (26%)
CBM_14 272..321 CDD:426342 11/49 (22%)

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