DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-B and obst-G

DIOPT Version :10

Sequence 1:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:281 Identity:64/281 - (22%)
Similarity:92/281 - (32%) Gaps:78/281 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 TEECPEPN-GFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYSPIEEKCDLPYNIDCMKRSK-- 144
            |..|...| |..|....|..||.|.||......|....:||   |:...||.|.|:||:...|  
  Fly    29 TSLCEGKNGGLLPMFGSCKGYYVCADGNAVTGTCEKNTLFN---PLTLHCDDPDNVDCIFDGKDN 90

  Fly   145 -----------------------------LQTPQPSL---HCPRKNGYFGHEKPGICDKFYFCVD 177
                                         .:.|:|:.   .|..|.......|.|.|.::|.|..
  Fly    91 IVDDTSSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLTKNGSCQEYYVCKA 155

  Fly   178 GQFNMITCPAGLVFNPKTGICGWPDQVGVTGCKSED-------VFDFECPKVNESIAVTHPRYAD 235
            .:.::.:||....|:|...||....:...:|...|:       .....|....|:..|.|     
  Fly   156 KKPHLRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDEKENSLVAH----- 215

  Fly   236 PNDCQFFYVCVN-----GDLPRRNGCKLGQVFDEEKETCDWARKVPDCADWYKDRLTDKELDELE 295
            .:||..|.:|.|     .|      |..|..|:.....||:. |:..|.            .:|.
  Fly   216 RSDCGKFMLCSNMMFLVMD------CPTGLHFNIATSRCDYP-KIAKCQ------------TKLN 261

  Fly   296 NPKPKTTTTKRPPRVRGQSRR 316
            ..|.|   :|:|.| :.:.||
  Fly   262 ESKSK---SKKPVR-KSKKRR 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-BNP_609339.1 CBM_14 89..139 CDD:426342 17/50 (34%)
CBM_14 156..204 CDD:426342 12/47 (26%)
CBM_14 233..278 CDD:426342 12/49 (24%)
obst-GNP_648529.1 CBM_14 32..83 CDD:426342 18/53 (34%)
CBM_14 132..184 CDD:426342 13/51 (25%)
CBM_14 204..256 CDD:426342 16/63 (25%)

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