DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-B and CG4835

DIOPT Version :10

Sequence 1:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_647965.3 Gene:CG4835 / 38619 FlyBaseID:FBgn0035607 Length:1224 Species:Drosophila melanogaster


Alignment Length:353 Identity:77/353 - (21%)
Similarity:110/353 - (31%) Gaps:109/353 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PPSQRHLPPRNRDPVQEASVVPKSKQTAAEKEYEPTEEC-PEPNGFYPDSKQCDKYYACLDGVPT 111
            |.:...:||.:   ..|..||........|::|     | |:.||||.....|..|.||.:|...
  Fly   243 PTTTTEMPPTS---TTEEDVVCGPTPEGIEEDY-----CVPKGNGFYEYPYNCSGYLACKNGCTD 299

  Fly   112 ERLCADGMVFNDY-----SPIEEKCD-LPYNIDCMKRSKLQTPQ----PSL-------------- 152
            ...|....:||::     :|...:|| ||:.......:|..||.    ||:              
  Fly   300 LDYCQPDKLFNNWLHICDTPDSVRCDPLPFPTTPGTTNKPTTPSVTTTPSITTTPSTPTTLPSDG 364

  Fly   153 ---------------------------HC-PRKNG----YFGHEKPGICDKFYFCVDGQFNMITC 185
                                       .| ..|:|    |.|:     |.::..|.|.|..|..|
  Fly   365 STTEIHSSTTEEIVTTTDGLPSDVDPNDCKDEKDGTIFAYIGN-----CSEYLICKDNQVQMGHC 424

  Fly   186 PAGLVFNPKTGICGWPDQVGVTGCKSEDVFDFECP----------KVNESIAVT----------- 229
            |...:|||...:|..||.|...|.::........|          ....::|.|           
  Fly   425 PPNTLFNPDLLVCDEPDDVVCLGDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQE 489

  Fly   230 -HPRYADPNDCQFFYVCVNGDLPRRNGCKLGQVFDEEKETCDWARKVPDCADWYKDRLTDKELDE 293
             ...::.|:||..:|:|:.|.......|..|..||.....|.     ||.|            .:
  Fly   490 LGASFSYPDDCSKYYLCLGGGQWTLAPCIYGSYFDPSTGQCG-----PDVA------------PD 537

  Fly   294 LENPKPKTTTTKRPPRVRGQSRRKPQPK 321
            ...|...||||.........:.|...||
  Fly   538 ACKPSQVTTTTTTTTTETTTTERNTTPK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-BNP_609339.1 CBM_14 89..139 CDD:426342 17/55 (31%)
CBM_14 156..204 CDD:426342 17/51 (33%)
CBM_14 233..278 CDD:426342 12/44 (27%)
CG4835NP_647965.3 CBM_14 51..103 CDD:426342
CBM_14 185..237 CDD:426342
CBM_14 273..322 CDD:426342 15/48 (31%)
CBM_14 393..444 CDD:426342 18/55 (33%)
CBM_14 485..539 CDD:426342 14/70 (20%)
CBM_14 585..638 CDD:426342
CBM_14 661..714 CDD:426342
CBM_14 744..796 CDD:426342
CBM_14 914..962 CDD:426342
CBM_14 1175..1212 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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