DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment obst-B and CG4835

DIOPT Version :9

Sequence 1:	NP_609339.1	Gene:	obst-B / 34336	FlyBaseID:	FBgn0027600	Length:	337	Species:	Drosophila melanogaster
Sequence 2:	NP_647965.3	Gene:	CG4835 / 38619	FlyBaseID:	FBgn0035607	Length:	1224	Species:	Drosophila melanogaster

Alignment Length:	353	Identity:	77/353 - (21%)
Similarity:	110/353 - (31%)	Gaps:	109/353 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    48 PPSQRHLPPRNRDPVQEASVVPKSKQTAAEKEYEPTEEC-PEPNGFYPDSKQCDKYYACLDGVPT 111
            |.:...:||.:   ..|..||........|::|     | |:.||||.....|..|.||.:|...
  Fly   243 PTTTTEMPPTS---TTEEDVVCGPTPEGIEEDY-----CVPKGNGFYEYPYNCSGYLACKNGCTD 299

  Fly   112 ERLCADGMVFNDY-----SPIEEKCD-LPYNIDCMKRSKLQTPQ----PSL-------------- 152
            ...|....:||::     :|...:|| ||:.......:|..||.    ||:
  Fly   300 LDYCQPDKLFNNWLHICDTPDSVRCDPLPFPTTPGTTNKPTTPSVTTTPSITTTPSTPTTLPSDG 364

  Fly   153 ---------------------------HC-PRKNG----YFGHEKPGICDKFYFCVDGQFNMITC 185
                                       .| ..|:|    |.|:     |.::..|.|.|..|..|
  Fly   365 STTEIHSSTTEEIVTTTDGLPSDVDPNDCKDEKDGTIFAYIGN-----CSEYLICKDNQVQMGHC 424

  Fly   186 PAGLVFNPKTGICGWPDQVGVTGCKSEDVFDFECP----------KVNESIAVT----------- 229
            |...:|||...:|..||.|...|.::........|          ....::|.|
  Fly   425 PPNTLFNPDLLVCDEPDDVVCLGDRTTTPIPTTIPTTTTEKTTPTTTTTTVATTLGPDQLCDGQE 489

  Fly   230 -HPRYADPNDCQFFYVCVNGDLPRRNGCKLGQVFDEEKETCDWARKVPDCADWYKDRLTDKELDE 293
             ...::.|:||..:|:|:.|.......|..|..||.....|.     ||.|            .:
  Fly   490 LGASFSYPDDCSKYYLCLGGGQWTLAPCIYGSYFDPSTGQCG-----PDVA------------PD 537

  Fly   294 LENPKPKTTTTKRPPRVRGQSRRKPQPK 321
            ...|...||||.........:.|...||
  Fly   538 ACKPSQVTTTTTTTTTETTTTERNTTPK 565

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
obst-B	NP_609339.1	CBM_14	89..139	CDD:279884	17/55 (31%)
		CBM_14	156..204	CDD:279884	17/51 (33%)
		CBM_14	233..278	CDD:279884	12/44 (27%)
CG4835	NP_647965.3	CBM_14	51..103	CDD:279884
		CBM_14	185..237	CDD:279884
		CBM_14	273..322	CDD:279884	15/48 (31%)
		CBM_14	393..444	CDD:279884	18/55 (33%)
		CBM_14	485..539	CDD:279884	14/70 (20%)
		CBM_14	585..638	CDD:279884
		CBM_14	661..714	CDD:279884
		CBM_14	744..796	CDD:279884
		CBM_14	914..962	CDD:279884
		CBM_14	1175..1212	CDD:279884
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45444064
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23301
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940