DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-B and cpg-2

DIOPT Version :9

Sequence 1:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:242 Identity:59/242 - (24%)
Similarity:92/242 - (38%) Gaps:71/242 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 EYEPTEECPEPNGFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYSPIEEKCDLPYNI-DCMKR 142
            |.|||.| .:.:|.:|:......:..|..|:.....|...:|||   |....||.|.:: :|   
 Worm   242 ELEPTCE-GKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFN---PTILVCDWPRDVAEC--- 299

  Fly   143 SKLQTPQPSLHCPRKNGYFGHEKPGIC-DKFYFCVDGQFNMITCPAGLVFNPKTGICGWPDQVGV 206
            :.|.||||:  | .::|||..   |.| ..|..|.:|:..::.|||||.|:..|..|.:...|. 
 Worm   300 AGLPTPQPT--C-EEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS- 357

  Fly   207 TGCKSEDVFDFECPKVN--ESIAVTHPR----------------------YADPNDCQFFYVCVN 247
                       ||.:.:  ||...:..:                      ..:.|.|    |.::
 Worm   358 -----------ECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQC----VGLD 407

  Fly   248 GDL------PR----RNG------CKLGQVFDEEKETCDWARKVPDC 278
            ..|      ||    :||      |....||:::...||:.:....|
 Worm   408 NGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-BNP_609339.1 CBM_14 89..139 CDD:279884 12/50 (24%)
CBM_14 156..204 CDD:279884 16/48 (33%)
CBM_14 233..278 CDD:279884 13/60 (22%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:279884
CBM_14 138..190 CDD:279884
ChtBD2 245..293 CDD:214696 14/51 (27%)
CBM_14 311..359 CDD:279884 17/62 (27%)
CBM_14 403..454 CDD:279884 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157840
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23301
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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