DRSC/TRiP Functional Genomics Resources

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Protein Alignment obst-B and cpg-1

DIOPT Version :10

Sequence 1:NP_609339.1 Gene:obst-B / 34336 FlyBaseID:FBgn0027600 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001021159.1 Gene:cpg-1 / 175586 WormBaseID:WBGene00000465 Length:584 Species:Caenorhabditis elegans


Alignment Length:301 Identity:67/301 - (22%)
Similarity:92/301 - (30%) Gaps:108/301 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PVQEASVVPKSKQTAAEKEYEPTEECPEPNGFYPDSKQCDKYYACLDGVPTERLCADGMVFNDYS 125
            ||:||:..|....|..|   |.|.|...|...|..:...:..     .||.|...      :.|:
 Worm   139 PVEEATTTPAEDVTVPE---ETTTEAYAPVDDYSTTTPAEDV-----PVPVETTA------SPYA 189

  Fly   126 PIEEKCDLPYNIDCMKRSKLQTPQPSLHCP------------RKNGYFGHEKPGIC-DKFYFCVD 177
            ||     :||.          |..|:...|            :.:|::..   |.| |.:..|.:
 Worm   190 PI-----VPYT----------TGAPAADEPVTRSAVTKSCVGKADGFYSF---GECSDHYTACSN 236

  Fly   178 GQFNMITCPAGLVFNPKTGICGW----PDQVGVTGCKSEDVFDFECPKVNESIAVTHPRYADPND 238
            |....:.|||.|.|:....||.:    |:....:| ..|...|...|   ||             
 Worm   237 GYLIPMQCPARLAFDEARVICDYVMNVPECTNGSG-NDEGSADETTP---ES------------- 284

  Fly   239 CQFFYVCVNGDLPRRNGCKLGQVFDEEKETCDWARKVPDCADW-------YKDRLTDKELDELEN 296
                    :|::|..||...       :||...|..||...|:       |..|.          
 Worm   285 --------SGEMPYSNGYGY-------EETTTVAEDVPSTKDYAEPIAAAYVARY---------- 324

  Fly   297 PKPKTTTTKRPPRVRGQSRRKPQPKRVEPEQVKEEEEEEEE 337
            |..|||....|....|          .|||.|:......||
 Worm   325 PSEKTTAENVPTTTIG----------YEPEVVETTAPYVEE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-BNP_609339.1 CBM_14 89..139 CDD:426342 10/49 (20%)
CBM_14 156..204 CDD:426342 14/52 (27%)
CBM_14 233..278 CDD:426342 9/44 (20%)
cpg-1NP_001021159.1 CBM_14 61..113 CDD:426342
rne <116..206 CDD:236766 23/95 (24%)
CBM_14 214..266 CDD:426342 14/54 (26%)
rne <321..499 CDD:236766 13/55 (24%)
CBM_14 <539..576 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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