DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trp1 and C18E9.2

DIOPT Version :9

Sequence 1:NP_723510.1 Gene:Trp1 / 34333 FlyBaseID:FBgn0011584 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_495908.2 Gene:C18E9.2 / 174429 WormBaseID:WBGene00007683 Length:364 Species:Caenorhabditis elegans


Alignment Length:366 Identity:133/366 - (36%)
Similarity:201/366 - (54%) Gaps:36/366 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KPSKDEKNVAKWLKKNVKTKKTKFLSHIVEYFTSSKAIDALLKSKFTEGS--NPLFTTREQVIEF 99
            |.:|:::::||:::.|..|..|.|..:.|.||:.:||:|.|.:||:...:  :.:|.||:....:
 Worm    16 KMTKEQEDIAKYIRFNCPTATTMFEGNEVHYFSGNKAVDTLWESKYGNKAKKDAMFKTRDDCFHY 80

  Fly   100 LDVMLEHKFFHRAKKVPVTLEEIRGKSGGDKKADKEKTQ----DKEKDKAKDEKKDTDPEGDNGQ 160
            :..:...:.|.||||:....:|.:.| |.|..|:..|:.    :|...|||:|:..|:.|||..:
 Worm    81 ICELNSKQLFFRAKKLVAKKKENKDK-GNDSSAEVTKSPKGVVEKRNKKAKEEETATEAEGDEKE 144

  Fly   161 GDGGASGNEKEKEKKEKKKRKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLGAVGIC 225
                  ..:.||:.:||||:|::|.:|..|.|||..:.|||::||.||...|.|.::|:|.:..|
 Worm   145 ------VKKDEKKDEEKKKKKVKLLVHEVQAFVDDKDVYVWVFDPTPLMKKIIGVLMLVGTIVGC 203

  Fly   226 LFPLWPPLLRKGVYYLSIAAAGFLVFILALTIVRLIVFIIVWALTGGKLHFWIFPNLTEDVSFFA 290
            ||||||..||:||||:||...|....|:...|:|.|:|.|::|:|.||...|:.||||||.....
 Worm   204 LFPLWPVWLRQGVYYVSITGIGCFAAIIVTAILRTILFGIIYAVTFGKHKLWVLPNLTEDCGVLE 268

  Fly   291 SFWPLYESNYNSDPNNSSAKTDKKSKSKDKKKEKESDAEDTAVDADGDADGDVDAEVSTLEPEKI 355
            ||.|.|...|..| ....||.|||.|.  .||||:||||:...|           .::..:.:| 
 Worm   269 SFQPWYTYEYVGD-EKKEAKKDKKDKK--SKKEKDSDAEEEEQD-----------HIAAEQEQK- 318

  Fly   356 ELIKEHDTDMEIRKRRKVGADD-YEEDDVDEEETKAQPKDS 395
               :|.|.|.|  |..:...|| ||:  :::||..|.|..|
 Worm   319 ---EEEDDDAE--KNSQASTDDNYEK--IEDEEISAPPSPS 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trp1NP_723510.1 Sec62 105..303 CDD:281790 82/201 (41%)
C18E9.2NP_495908.2 Sec62 46..280 CDD:281790 93/240 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157649
Domainoid 1 1.000 161 1.000 Domainoid score I2437
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H137673
Inparanoid 1 1.050 214 1.000 Inparanoid score I2341
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49369
OrthoDB 1 1.010 - - D1474000at2759
OrthoFinder 1 1.000 - - FOG0005183
OrthoInspector 1 1.000 - - oto18799
orthoMCL 1 0.900 - - OOG6_107760
Panther 1 1.100 - - LDO PTHR12443
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1311
SonicParanoid 1 1.000 - - X4215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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