DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoYb and TDRD12

DIOPT Version :9

Sequence 1:NP_001245959.1 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster
Sequence 2:XP_011525773.1 Gene:TDRD12 / 91646 HGNCID:25044 Length:1335 Species:Homo sapiens


Alignment Length:1540 Identity:299/1540 - (19%)
Similarity:540/1540 - (35%) Gaps:404/1540 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 WILDYGFNLCCSVWDLWPLPDH------LSRSLCDF---------------KEGGVALIAPHSGS 136
            |::..|    ||     |..||      |:.::.||               :||.|.::......
Human    16 WVIIKG----CS-----PFLDHDVDYQKLNSAMNDFYNSTCQDIEIKPLTLEEGQVCVVYCEELK 71

  Fly   137 VWSRSAIESLDKQLEDANQLTFQVVHRGKSNRNFGLLKFRSSCQTED-AANFLIKQDQGRCKETL 200
            .|.|:.::|:....:                      ::.:.|...| |.|..:|....|.....
Human    72 CWCRAIVKSITSSAD----------------------QYLAECFLVDFAKNIPVKSKNIRVVVES 114

  Fly   201 TMAIPYEDISFEKAEINDMAIDTRPRLRRILELVVLLSENAKESTPTPSAIQQKKLDALLQSHET 265
            .|.:||....|.       ...|:|        |.|..:..::||   ..:..||.|.....:..
Human   115 FMQLPYRAKKFS-------LYCTKP--------VTLHIDFCRDST---DIVPAKKWDNAAIQYFQ 161

  Fly   266 YLIPNSVKLLSKVQSISESSMQTALANRSKQ----ISKELPHK--ANQSEDNRKKEVKYLESE-- 322
            .|:..:.::.:::.::.|.:.:..|....|.    ::.:|..|  |......:.|.:.|||..  
Human   162 NLLKATTQVEARLCAVEEDTFEVYLYVTIKDEKVCVNDDLVAKNYACYMSPTKNKNLDYLEKPRL 226

  Fly   323 NLSECLSKVKLSS--------YQQKNT----DSSTLSGPR-------------NLASSSTNSNSN 362
            |:....|..||:.        .|.|:.    ||..::.|.             :|..::|..:..
Human   227 NIKSAPSFNKLNPALTLWPMFLQGKDVQGMEDSHGVNFPAQSLQHTWCKGIVGDLRPTATAQDKA 291

  Fly   363 VRKSMTLF------KSSGAHLTTSLSVPLTENCTNQSNNRTVVFSMDKMEQIFND-------MLG 414
            |:.:|...      ||...|...||      ..||:....:|.:...:...|:.|       .|.
Human   292 VKCNMDSLRDSPKDKSEKKHHCISL------KDTNKRVESSVYWPAKRGITIYADPDVPEASALS 350

  Fly   415 KNPSE---RSVQKNRSQMPNSNVSTTKRCVEKMHV-----CRSENMGDRKPSVCLKHL-----VL 466
            :..:|   |..:|......||       ||:.:..     .|::.:.|.:....||.|     ||
Human   351 QKSNEKPLRLTEKKEYDEKNS-------CVKLLQFLNPDPLRADGISDLQQLQKLKGLQPPVVVL 408

  Fly   467 AHSPEPVNPVTSYKELPLGNTILNAMDDLNFQTPLPTQIYAWPHLVNRGSLVLVNPSGTGRSWSY 531
            .:.   :.|..:....||...:..|:....|..|..|:.|:||.:.....:|:::...:......
Human   409 RNK---IKPCLTIDSSPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCESNPLLYL 470

  Fly   532 LPVICSSVLSS---FENVTSNLDTRIAPGPLAILIVDSVENAKKLASHCEFLMKDFNTQN----- 588
            |||:  :||.:   ::::.|.      .||||:::....:.|:.:..    |:.:::..:     
Human   471 LPVL--TVLQTGACYKSLPSR------NGPLAVIVCPGWKKAQFIFE----LLGEYSMSSRPLHP 523

  Fly   589 -LKVVNTHAHSMMDVYMMLLNSCGVLVTTLAHLNNILSNELPLVNPTRLEFIIFDDYDRKRLDNA 652
             |..:..|.....:.  .|...|.|:|||...|..:|:.:..|.  .||..:|.|:.:...|:..
Human   524 VLLTIGLHKEEAKNT--KLPRGCDVIVTTPYSLLRLLACQSLLF--LRLCHLILDEVEVLFLEAN 584

  Fly   653 ELLKEV---FQK---VNSIGGLSKQLVLVAQQW--HSER-FQKLLNRTTKPLILFGDFLEAALYG 708
            |.:..:   |:|   |........|:|.|...|  |.|. .::.:|   .|.|:.....||||||
Human   585 EQMFAILDNFKKNIEVEERESAPHQIVAVGVHWNKHIEHLIKEFMN---DPYIVITAMEEAALYG 646

  Fly   709 GLKFNVTLRSSALKARQLLDILAEQDGSKKRTLIYCKNQMELEELSAILIEAGLQCVDISK---- 769
            .::..|.|.....|...||..|.......::|||:..:..|.|.:..::..:.:.|:.:.|    
Human   647 NVQQVVHLCLECEKTSSLLQALDFIPSQAQKTLIFTCSVAETEIVCKVVESSSIFCLKMHKEMIF 711

  Fly   770 -AQN---------QSPNRLMLVDDSQVRKQLPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRNL 824
             .||         .|.::::|.........|.:.:...:||||.|.|...|..|.:.|:|:....
Human   712 NLQNVLEQWKKKLSSGSQIILALTDDCVPLLAITDATCVIHFSFPASPKVFGGRLYCMSDHFHAE 776

  Fly   825 FTKPIGRG-QDLITYILMDENNAKEWPRIMKFLQDHGLT--------TQSMPDSEQQLDNTLPYC 880
            ...|..:| :...:.:|:.|.:|.....::::|:.....        |..:.::::......|.|
Human   777 QGSPAEQGDKKAKSVLLLTEKDASHAVGVLRYLERADAKVPAELYEFTAGVLEAKEDKKAGRPLC 841

  Fly   881 PYKLSNGNCN------RNQCNKRHHF-LKTDLP-KIGNPLLQPGTLIRC----------KFLKAY 927
            ||..:.|.||      :..|..||.. .:|||| |:.:..|.....|:.          .|.:..
Human   842 PYLKAFGFCNHFIFRDKRICPDRHRINPETDLPRKLSSQALPSFGYIKIIPFYILNATNYFGRIV 906

  Fly   928 DPAHMAV-----MPMKYKSKDSTIWIDVPYPSYPSTLVFKM-SFGVPRKVHNPCKINDVCFVQHK 986
            | .||.:     ..|....|||.           .|.|.|: .||             :..:..|
Human   907 D-KHMDLYATLNAEMNEYFKDSN-----------KTTVEKVEKFG-------------LYGLAEK 946

  Fly   987 ELLSRVRIV------DNPARPQVTVQLMDYGTELLQVKASQLLECPEQFRDLQQLAMDIRLSGLA 1045
            .|..||:::      |..|...:.|:.:|.|...| |...|||..||.|..|...|::..:..:.
Human   947 TLFHRVQVLEVNQKEDAWALDDILVEFIDEGRTGL-VTRDQLLHLPEHFHTLPPQAVEFIVCRVK 1010

  Fly  1046 GSGQGGMWSTDSIQWVQDRFADINEEIMQITVDFGVLDVAYVKEIALIEECPTMLTSVYKTFLRK 1110
            .:.....|:....:::..:   |..::....|...:.:..::..:..|....::.|||....:|.
Human  1011 PADNEIEWNPKVTRYIHHK---IVGKLHDAKVILALGNTVWIDPMVHITNLSSLKTSVIDYNVRA 1072

  Fly  1111 ELLRQGFAKIDSTSILELRAIHEQWKQEMEELRANKENIVCSSTDLDNRDSKITSLQNKQATCSS 1175
            |:|..|.. ||:...:|          ::::||               .|:||.:       |  
Human  1073 EILSMGMG-IDNPEHIE----------QLKKLR---------------EDAKIPA-------C-- 1102

  Fly  1176 GKEEDLNPVETPLIIASPNSNETLEERKHVSDKVQNKIDELNDFNKSVEIEHVQDASPLDSSTAL 1240
              ||.|:.....:...||     .:::.|.|::                 :..|...|.:.:..|
Human  1103 --EESLSQTPPRVTGTSP-----AQDQDHPSEE-----------------QGGQGTPPAEDAACL 1143

  Fly  1241 INTLIHELNTKSPTKKKNTQEFIKNIVHEDETQSIHHEISSSTNSLKQDKTIVVGPQDPPKELFL 1305
            .:....:...:...:.|.:.|..|     .||      :|.:|......:|     ..||.:.| 
Human  1144 QSPQPEDTGAEGGAESKTSSENQK-----PET------LSGNTEGAFISRT-----AQPPLKSF- 1191

  Fly  1306 QYLNCATKSRESVYPMVKWHQTLTHIELVVEQQMLEYKLGLDGNTLEYK--------VNETTPPQ 1362
                         :|.:||.|         ::.::..|:.: .|..:||        |.......
Human  1192 -------------HPQIKWFQ---------KEDVVILKIRI-RNVKDYKCQYLRDRVVFSAWVGD 1233

  Fly  1363 RFI---LNLLGEVRIDSVKQHGYYLHIKLTKVGLLFHWPTLLNSLYVQKHAHW--LIYDSERSHG 1422
            :|.   |.|.|.:|.|..:              .:......:.:|..::...|  |:    |...
Human  1234 KFYLADLELRGNIRKDDCQ--------------CVIRNDEPVITLAKERREAWCHLL----RQRN 1280

  Fly  1423 PPPSFGLVLWEG--------YLTHKKTKSYSDSESSE-FSSTPED 1458
            |..:|....||.        .:.:.|...|:.:|..| .|||.||
Human  1281 PNVAFDFDHWEDCEEDSHFPKVVNSKNLPYTVTEVVEDSSSTSED 1325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoYbNP_001245959.1 TUDOR 7..115 CDD:278965 7/27 (26%)
SrmB 475..877 CDD:223587 93/442 (21%)
P-loop_NTPase 480..>646 CDD:304359 37/174 (21%)
TUDOR 927..1043 CDD:278965 31/127 (24%)
TDRD12XP_011525773.1 TUDOR 10..128 CDD:278965 26/149 (17%)
TUDOR 60..109 CDD:119391 10/70 (14%)
P-loop_NTPase 419..635 CDD:304359 50/234 (21%)
SrmB 422..881 CDD:223587 107/477 (22%)
P-loop_NTPase 659..762 CDD:304359 22/102 (22%)
TUDOR <913..1004 CDD:278965 28/115 (24%)
alpha-crystallin-Hsps_p23-like 1193..1297 CDD:294116 23/131 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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