DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SoYb and PRP5

DIOPT Version :9

Sequence 1:NP_001245959.1 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_009796.1 Gene:PRP5 / 852539 SGDID:S000000441 Length:849 Species:Saccharomyces cerevisiae


Alignment Length:809 Identity:163/809 - (20%)
Similarity:307/809 - (37%) Gaps:209/809 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 IDTRPRLRRILELVVLLSENAKESTPTPSAIQQKK--LDALLQSHETY---LIPNSVKLLSKVQS 280
            ||::..:.|    ..||.|..|:.    :..:|||  .|| .:.|:|.   ::.||::.....:.
Yeast     4 IDSKQNINR----ESLLEERRKKL----AKWKQKKAQFDA-QKEHQTSRNDIVTNSLEGKQTTEK 59

  Fly   281 ISESSMQTALANRSKQISKELPHKANQSEDNRKKE--VKYLESENLSECLSKVKLS-SYQQKNTD 342
            .:|         |.:::.:||..:.|:.   ||.:  |....|:..|: .||||.. |:...:.|
Yeast    60 FTE---------RQERVKEELRKRKNEF---RKSDEPVSVKPSKKKSK-RSKVKKKISFDFSDDD 111

  Fly   343 SSTLSGPRNLASSSTNSNSNVRKSMTLFKSSGAHLTTSLSVPLTENCTN-----QSNNRTVVFS- 401
            .|.:       ..|..|..:::|         |....:...||.|..|:     .||::.:... 
Yeast   112 DSEI-------GVSFRSKEHIQK---------APEHDNEKDPLDEFMTSLKEEKMSNSKGMYDRG 160

  Fly   402 --MDKMEQIFNDMLGKNPSERSVQKNRSQMPNSNVS------TTKRC------------------ 440
              :|..:|:|.  ||....| .|:.|..   |||::      ..||.                  
Yeast   161 DILDVEDQLFE--LGGTDDE-DVEDNTD---NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFY 219

  Fly   441 VEKMHVCRSENMGDRKPSVCLKHLVLAHSPEPVNPVTSYKELPLG-NTILNAMDDLNFQTPLPTQ 504
            :|...|.....|...:..:.|.::.:..:..| .|||.:.:|.|. :|::...:.|:|.:..|.|
Yeast   220 IESETVSSMSEMEVEELRLSLDNIKIKGTGCP-KPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQ 283

  Fly   505 IYAWPHLVNRGSLVLVNPSGTGRSWSYLPVICSSV-----LSSFENVTSNLDTRIAPGPLAILIV 564
            ..|.|.:::...::.::.:|:|::.|||..:...|     ||..|.           ||:.:::.
Yeast   284 SQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHET-----------GPMGLILA 337

  Fly   565 DSVENAKKLASHCEFL-MKDFNTQNLKVVNTHAHSMMDVYMMLLNSCGVLVTTLAHLNNILS-NE 627
            .:.|.|  |..|.|.. ..:.:|....|..|....|......|.....::|.|.....:||: |:
Yeast   338 PTRELA--LQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLND 400

  Fly   628 LPLVNPTRLEFIIFDDYDRKRLDNAELLKEVFQKVNSIGGLSKQLVLVAQQWHSERFQKLLNRTT 692
            ..|::..|:.|::.|:.|  ||.:.....::.|.:.::.. .||.||     .|..|...|.   
Yeast   401 GKLLSTKRITFVVMDEAD--RLFDLGFEPQITQIMKTVRP-DKQCVL-----FSATFPNKLR--- 454

  Fly   693 KPLILFGDFLEAALYGGLKFNVTLRSSAL-------KAR-------------QLL--------DI 729
                   .|....|:..:  ::|:.|..:       |.|             ||:        ::
Yeast   455 -------SFAVRVLHSPI--SITINSKGMVNENVKQKFRICHSEDEKFDNLVQLIHERSEFFDEV 510

  Fly   730 LAEQDGSKK-------RTLIYCKNQMELEELSAILIEAGL-------------QCVDISKAQNQS 774
            .:|.||...       :.:|:..:|...:.:|..|:.||:             :.:::.|.:.:.
Yeast   511 QSENDGQSSDVEEVDAKAIIFVSSQNICDFISKKLLNAGIVTCAIHAGKPYQERLMNLEKFKREK 575

  Fly   775 PNRLMLVDDSQVRKQLPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRNLFTKPIGRGQDLITYI 839
             |.::|..: .:.:.|.|..:.|:|.::..::   |::..||.....|.      .|....||.:
Yeast   576 -NSILLCTE-VLSRGLNVPEVSLVIIYNAVKT---FAQYVHTTGRTARG------SRSGTAITLL 629

  Fly   840 LMDENNAKEWPRIMKFLQDH------GLTTQSMPDSEQQLDNTLPYCPYKLSNGNCNR---NQCN 895
            |.||.:...  .:.|.::|.      .|..:.:.:...:.::.:....::||.|...:   |..:
Yeast   630 LHDELSGAY--ILSKAMRDEEIKALDPLQAKELQEMSAKFESGMKKGKFRLSKGFGGKGLENIKS 692

  Fly   896 KRHHFLKTDL-------------PKIGNP 911
            ||......||             .||.||
Yeast   693 KREEAQNKDLELKKNDKRSDDLEKKISNP 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoYbNP_001245959.1 TUDOR 7..115 CDD:278965
SrmB 475..877 CDD:223587 90/463 (19%)
P-loop_NTPase 480..>646 CDD:304359 39/173 (23%)
TUDOR 927..1043 CDD:278965
PRP5NP_009796.1 SrmB 227..731 CDD:223587 105/542 (19%)
DEADc_DDX46 244..468 CDD:350711 56/257 (22%)
KH-I_PRP5_like 749..837 CDD:411902
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.