DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoYb and AT3G09620

DIOPT Version :10

Sequence 1:NP_609335.3 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_001327248.1 Gene:AT3G09620 / 820119 AraportID:AT3G09620 Length:990 Species:Arabidopsis thaliana


Alignment Length:861 Identity:149/861 - (17%)
Similarity:284/861 - (32%) Gaps:293/861 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IEQDLKDYCSSERTKQVYVEDERVIVRYQRWSPPKLVRGVVRRRQNEEYLVWILDYGFNLCCSVW 106
            :|:..:|....:..||:..|.|:...|.|.|...|        |||||                 
plant   142 VEKKTRDEQVEDEQKQLAEEVEKRRRRVQEWQELK--------RQNEE----------------- 181

  Fly   107 DLWPLPDHLSRSLCDFKEGGVALIAPHSGSVWSRSAIESLDKQLEDANQLTFQVVHRGKSNRNFG 171
                         ...:..|     |.:|..|      :||.:.:|.                  
plant   182 -------------AQIESKG-----PETGKAW------TLDGESDDE------------------ 204

  Fly   172 LLKFRSSCQTEDAANFLIKQDQGRCKETLTMAIPYEDISFEKAEINDMAIDTRPRLRRILELVVL 236
                             :|.|                        ::|.:|...:|....:..::
plant   205 -----------------VKSD------------------------SEMDVDRDTKLENGGDAKMV 228

  Fly   237 LSENAKESTPTPS------AIQQKKLDALLQSHETYLIPNSVKLLSKVQSISESSMQTALANRSK 295
            .|||  |:..|.|      |..:.::|.|.....|.::|...||.:.|                 
plant   229 ASEN--ETAVTVSENGGDRAADEDEIDPLDAFMNTMVLPEVEKLSNIV----------------- 274

  Fly   296 QISKELPHKANQSE--DNRKKEVKYLESENLSECLSKVKLSSYQQKNTDSSTLSGPRNLASSSTN 358
             |...|..|.|..|  |..||.            .:|..|....|.....|..|.|::....|.:
plant   275 -IDGILDFKMNGKETGDQAKKG------------FNKAALGRIIQGEDSDSDYSEPKSDDDPSLD 326

  Fly   359 SNSNVRKSMTLFKSSGAHLTTSLSVPLTENCTNQSNNRTVVFSMDKMEQIFNDMLGKNPSERSVQ 423
            .:.  .:.|...|.:.|                           :|:..:.:..:...|..::..
plant   327 EDD--EEFMKRVKKTKA---------------------------EKLSLVDHSKIEYEPFRKNFY 362

  Fly   424 ---KNRSQMPNSNVSTTKRCVEKMHVCRSENMGDRKPSVCLKHLVLAHSPEPVNPVTSYKELPLG 485
               |:.|:|....|:..::.:|                  ||    .|..:...|:..:.:..|.
plant   363 IEVKDISRMTQDAVNAYRKELE------------------LK----VHGKDVPRPIQFWHQTGLT 405

  Fly   486 NTILNAMDDLNFQTPLPTQIYAWPHLVNRGSLVLVNPSGTGRSWSYLPVICSSVLSSFENVTSNL 550
            :.||:.:..||::.|:|.|..|.|.:::....:.|..:|:|::..:       ||....::....
plant   406 SKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGF-------VLPMLRHIKDQP 463

  Fly   551 DTRIAPGPLAILIVDSVENAKKLASHCEFLMKDFNTQNLKVVNTHAHSMMDVYMM---LLNSCGV 612
            ......||:.:::..:.|..:::.|.    ::.| ::.|.::....:....|...   |.....:
plant   464 PVEAGDGPIGLVMAPTRELVQQIYSD----IRKF-SKALGIICVPVYGGSGVAQQISELKRGTEI 523

  Fly   613 LVTTLAHLNNIL-SNELPLVNPTRLEFIIFDDYDRKRLDNAELLKEVFQKVNSIGGLSKQLVLVA 676
            :|.|...:.:|| ::...:.|..|:.:::.|:.||           :|..     |...|:..:.
plant   524 VVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADR-----------MFDM-----GFEPQITRIV 572

  Fly   677 QQWHSERFQKLLNRT-------------TKPLILFGDFLEAALYGGLKFN------VTLRSSALK 722
            |....:|...|.:.|             .||       :|..:.|....|      |.:|..:.:
plant   573 QNIRPDRQTVLFSATFPRQVETLARKVLNKP-------VEIQVGGRSVVNKDITQLVEIRPESER 630

  Fly   723 ARQLLDILAEQDGSKKRTLIYCKNQMELEELSAILIEAGLQCVDISKAQNQSPNRLMLVDDSQVR 787
            ..:||::|.|. ..|.:.|::.::|.:                .||..::...|  :|:..|...
plant   631 FSRLLELLGEW-YEKGKVLVFVRSQEK----------------SISDFKSDVCN--LLIATSVAA 676

  Fly   788 KQLPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRNLFTKPIGRGQDLITYILMDENNAKEWPRI 852
            :.|.|:.::|:::|..|..:..:..|...         |...||....:|:|  .|::||..|.:
plant   677 RGLDVKELELVVNFDAPNHYEDYVHRVGR---------TGRAGRKGCAVTFI--SEDDAKYAPDL 730

  Fly   853 MKFLQDHGLTTQSMPD 868
            :|.|:   |:.|.:||
plant   731 VKALE---LSEQPVPD 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoYbNP_609335.3 TUDOR 15..115 CDD:425754 15/72 (21%)
DEAD-like_helicase_N 488..>646 CDD:475120 29/161 (18%)
TUDOR 930..1043 CDD:425754
AT3G09620NP_001327248.1 PTZ00121 <3..294 CDD:173412 47/279 (17%)
DEADc_DDX46 386..607 CDD:350711 45/259 (17%)
SF2_C_DEAD 618..719 CDD:350174 24/128 (19%)
KH-I_AtRH42_like 887..989 CDD:411903
Blue background indicates that the domain is not in the aligned region.

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